RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 SPOCD1Q6ZMY3 1216 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
SNX13-212ENST00000498463 VSIG10LQ86VR7 867 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 SIAH1Q8IUQ4 282 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 YAF2Q8IY57 180 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 SLC15A4Q8N697 577 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 IL17RDQ8NFM7 739 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 ABHD4Q8TB40 342 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 THAP4Q8WY91 577 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 GFM2Q969S9 779 aaKnown RBP9.49□□□□□ -0.89
SNX13-212ENST00000498463 BARD1Q99728 777 aaKnown RBP9.49□□□□□ -0.89
SNX13-212ENST00000498463 BRD9Q9H8M2 597 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
SNX13-212ENST00000498463 MOCS1Q9NZB8 636 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 CFAP97Q9P2B7 532 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 ATRNL1Q5VV63 1379 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 RASSF9O75901 435 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 DNAJB5O75953 348 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 KNG1P01042 644 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 GNAI2P04899 355 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 MTHFD1P11586 935 aaKnown RBP9.48□□□□□ -0.89
SNX13-212ENST00000498463 JUPP14923 745 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 EGR1P18146 543 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 MC3RP41968 323 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 KCNQ1P51787 676 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 UCP3P55916 312 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 YBX1P67809 324 aaKnown RBP9.48□□□□□ -0.89
SNX13-212ENST00000498463 POU6F2P78424 691 aaPredicted RBP9.48□□□□□ -0.89
SNX13-212ENST00000498463 DUSP2Q05923 314 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 KRT28Q7Z3Y7 464 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 OR1N1Q8NGS0 311 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 MDM1Q8TC05 714 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 CENPIQ92674 756 aaPredicted RBP9.48□□□□□ -0.89
SNX13-212ENST00000498463 KCNC2Q96PR1 638 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 WRNIP1Q96S55 665 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 CHCHD6Q9BRQ6 235 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 PACSIN1Q9BY11 444 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 RLIMQ9NVW2 624 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 HS3ST4Q9Y661 456 aa9.48□□□□□ -0.89
SNX13-212ENST00000498463 OR14I1A6ND48 311 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 FCHO1O14526 889 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 KCNQ3O43525 872 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 GRPP07492 148 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 NPPBP16860 134 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 PRKAA2P54646 552 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 POLE2P56282 527 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 SMAD4Q13485 552 aaKnown RBP9.47□□□□□ -0.89
SNX13-212ENST00000498463 DOC2BQ14184 412 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 MAPKAPK3Q16644 382 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 SLC45A4Q5BKX6 768 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 AFMIDQ63HM1 303 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 STK32CQ86UX6 486 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 OR8H2Q8N162 312 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 SPSB4Q96A44 273 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 RRP36Q96EU6 259 aaKnown RBP9.47□□□□□ -0.89
SNX13-212ENST00000498463 JMJD4Q9H9V9 463 aa9.47□□□□□ -0.89
SNX13-212ENST00000498463 PAK6Q9NQU5 681 aaPredicted RBP9.47□□□□□ -0.89
SNX13-212ENST00000498463 MTO1Q9Y2Z2 717 aaKnown RBP9.47□□□□□ -0.89
SNX13-212ENST00000498463 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 ABLIM1O14639 778 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 ACTL6BO94805 426 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 CHGBP05060 677 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 RAP2AP10114 183 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 NCAM1P13591 858 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 SEC24CP53992 1094 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 NKAPLQ5M9Q1 402 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 ITPRIPL1Q6GPH6 555 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 PDXDC1Q6P996 788 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 INTS5Q6P9B9 1019 aaKnown RBP9.46□□□□□ -0.9
SNX13-212ENST00000498463 USP17L6PQ6QN14 398 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 NFXL1Q6ZNB6 911 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 KIAA0408Q6ZU52 694 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 ZDHHC14Q8IZN3 488 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 AFG1LQ8WV93 481 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 UCMAQ8WVF2 138 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 MYOCQ99972 504 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
SNX13-212ENST00000498463 PCDHAC1Q9H158 963 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 PABPC3Q9H361 631 aaKnown RBP9.46□□□□□ -0.9
SNX13-212ENST00000498463 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
SNX13-212ENST00000498463 USP40Q9NVE5 1235 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 IRAK4Q9NWZ3 460 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 SLC23A1Q9UHI7 598 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 CROTQ9UKG9 612 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 PLEKHM1Q9Y4G2 1056 aa9.46□□□□□ -0.9
SNX13-212ENST00000498463 MYO1CO00159 1063 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 MTSS1O43312 755 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 SLC43A1O75387 559 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 HMGCRP04035 888 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 GYS1P13807 737 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 KIR2DL3P43628 341 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 APBA1Q02410 837 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 MAPK7Q13164 816 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 ADAM15Q13444 863 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 CUL4BQ13620 913 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms