RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PRR23CQ6ZRP0 262 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 GAREM2Q75VX8 874 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 ARID3BQ8IVW6 561 aaPredicted RBP17.5■□□□□ 0.39
MUC1-220ENST00000498431 YAF2Q8IY57 180 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 TMEM209Q96SK2 561 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 GPR88Q9GZN0 384 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
MUC1-220ENST00000498431 SLC27A5Q9Y2P5 690 aa17.5■□□□□ 0.39
MUC1-220ENST00000498431 NUP210Q8TEM1 1887 aaPredicted RBP17.5■□□□□ 0.39
MUC1-220ENST00000498431 KIF26AQ9ULI4 1882 aaPredicted RBP17.5■□□□□ 0.39
MUC1-220ENST00000498431 TTC26A0AVF1 554 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 MYBPHLA2RUH7 354 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 SPECC1L-ADORA2AF8WAN1 911 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 PPEF2O14830 753 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 MAPTP10636 758 aaKnown RBP17.49■□□□□ 0.39
MUC1-220ENST00000498431 GUCY2CP25092 1073 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 LRPAP1P30533 357 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 CTHP32929 405 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 TNFSF9P41273 254 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 CDR1P51861 262 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 MCL1Q07820 350 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 STRN3Q13033 797 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 LRRC32Q14392 662 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 ZBTB6Q15916 424 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 KRT79Q5XKE5 535 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.49■□□□□ 0.39
MUC1-220ENST00000498431 ATAD1Q8NBU5 361 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 SPIRE2Q8WWL2 714 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 E2F7Q96AV8 911 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 KIF12Q96FN5 646 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 C8orf33Q9H7E9 229 aaPredicted RBP17.49■□□□□ 0.39
MUC1-220ENST00000498431 C17orf75Q9HAS0 396 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 GTSE1Q9NYZ3 720 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 LIMCH1Q9UPQ0 1083 aa17.49■□□□□ 0.39
MUC1-220ENST00000498431 ANK1P16157 1881 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 MTMR11A4FU01 709 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 CLDN3O15551 220 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 PAPSS2O95340 614 aaPredicted RBP17.48■□□□□ 0.39
MUC1-220ENST00000498431 PLS3P13797 630 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 EPHB3P54753 998 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 GPR17Q13304 367 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 PON2Q15165 354 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 ZRSR1Q15695 479 aaKnown RBP17.48■□□□□ 0.39
MUC1-220ENST00000498431 CSRP2Q16527 193 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 CENPPQ6IPU0 288 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 ZPBP2Q6X784 338 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 LONP2Q86WA8 852 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 FAM160A2Q8N612 972 aaPredicted RBP17.48■□□□□ 0.39
MUC1-220ENST00000498431 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
MUC1-220ENST00000498431 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 STK24Q9Y6E0 443 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 TSC2P49815 1807 aa17.48■□□□□ 0.39
MUC1-220ENST00000498431 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 OR6C75A6NL08 312 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 LACTBL1A8MY62 500 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 SEC24BO95487 1268 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 PRAMEF12O95522 483 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 CLTAP09496 248 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.39
MUC1-220ENST00000498431 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
MUC1-220ENST00000498431 ALDH1A3P47895 512 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
MUC1-220ENST00000498431 TNK2Q07912 1038 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 PLD1Q13393 1074 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 DNAJB7Q7Z6W7 309 aaPredicted RBP17.47■□□□□ 0.39
MUC1-220ENST00000498431 USP37Q86T82 979 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 PLIN2Q99541 437 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 ATXN3LQ9H3M9 355 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 PLEKHA5Q9HAU0 1116 aa17.47■□□□□ 0.39
MUC1-220ENST00000498431 UBQLN1Q9UMX0 589 aaKnown RBP17.47■□□□□ 0.39
MUC1-220ENST00000498431 CHD6Q8TD26 2715 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 SDK1Q7Z5N4 2213 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 FAM189A1O60320 539 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 GABRR2P28476 465 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 CNR2P34972 360 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 CCINQ13939 588 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 ST3GAL2Q16842 350 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 GPR158Q5T848 1215 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 OVOS1Q6IE37 1185 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 RALGPS2Q86X27 583 aaPredicted RBP17.46■□□□□ 0.39
MUC1-220ENST00000498431 PSMG2Q969U7 264 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
MUC1-220ENST00000498431 OXCT2Q9BYC2 517 aaPredicted RBP17.46■□□□□ 0.39
MUC1-220ENST00000498431 CNOT1A5YKK6 2376 aaKnown RBP17.45■□□□□ 0.38
MUC1-220ENST00000498431 CYP3A5P20815 502 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 PRPHP41219 470 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 SMTNP53814 917 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 SLC12A3P55017 1021 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
MUC1-220ENST00000498431 CYP4F8P98187 520 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 PPP2R3AQ06190 1150 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 MYBPC2Q14324 1141 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 CCDC6Q16204 474 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 ENOX2Q16206 610 aaKnown RBP17.45■□□□□ 0.38
MUC1-220ENST00000498431 ARHGAP29Q52LW3 1261 aa17.45■□□□□ 0.38
MUC1-220ENST00000498431 DGKKQ5KSL6 1271 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms