RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ETNPPLQ8TBG4 499 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 SYTL5Q8TDW5 730 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 LARP4BQ92615 738 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 STAMQ92783 540 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PWWP2AQ96N64 755 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 MXRA8Q9BRK3 442 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 TEKT3Q9BXF9 490 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 WDR11Q9BZH6 1224 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 TRIM5Q9C035 493 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 KCNH6Q9H252 994 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 PDLIM7Q9NR12 457 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 HOMER2Q9NSB8 354 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 KBTBD4Q9NVX7 518 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 ZMYM5Q9UJ78 669 aa5.87□□□□□ -1.47
HMGXB4-208ENST00000498325 IGLV3-22A0A075B6J6 115 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PVALEFA0A1B0GWK0 134 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 SHISA3A0PJX4 238 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 SOWAHDA6NJG2 315 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ABLIM1O14639 778 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MSH4O15457 936 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MAFGO15525 162 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 GAS7O60861 476 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 STAM2O75886 525 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ADCY5O95622 1261 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PTMAP06454 111 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TPM3P06753 285 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 SDHBP21912 280 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RPL10P27635 214 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RPA1P27694 616 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 CCND2P30279 289 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TERF1P54274 439 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MYL5Q02045 173 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PSMD2Q13200 908 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 GRB10Q13322 594 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 CUL4BQ13620 913 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 BAATQ14032 418 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PGM5Q15124 567 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 EPHA7Q15375 998 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 DPCR1Q3MIW9 517 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TRIM60Q495X7 471 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TMEM119Q4V9L6 283 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 HS1BP3Q53T59 392 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 NAALADL2Q58DX5 795 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MUM1L1Q5H9M0 696 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 HYIQ5T013 277 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF658Q5TYW1 1059 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 NCAPH2Q6IBW4 605 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 SARM1Q6SZW1 724 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 LBX2Q6XYB7 198 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 CEP128Q6ZU80 1094 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 DHX40Q8IX18 779 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 FAM13CQ8NE31 585 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ENOX1Q8TC92 643 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 NEK9Q8TD19 979 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 NSUN6Q8TEA1 469 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RAD54LQ92698 747 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC5A5Q92911 643 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 LENG9Q96B70 501 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TAAR1Q96RJ0 339 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RMDN3Q96TC7 470 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PLIN2Q99541 437 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MPHOSPH6Q99547 160 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RIT2Q99578 217 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PDCD2LQ9BRP1 358 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF577Q9BSK1 485 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 MMTAG2Q9BU76 263 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 POLR3CQ9BUI4 534 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 BLZF1Q9H2G9 400 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TUFT1Q9NNX1 390 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 RRAGDQ9NQL2 400 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PXMP2Q9NR77 195 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TBC1D22BQ9NU19 505 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 TCEAL9Q9UHQ7 104 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF214Q9UL59 606 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 AGTPBP1Q9UPW5 1226 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 DNM3Q9UQ16 869 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 UBIAD1Q9Y5Z9 338 aa5.86□□□□□ -1.47
HMGXB4-208ENST00000498325 PARP14Q460N5 1801 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CACNA1GO43497 2377 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 FRMPD4Q14CM0 1322 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 DNAH12Q6ZR08 3092 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 IPO5O00410 1097 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CBFA2T2O43439 604 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 SUV39H1O43463 412 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 PRICKLE3O43900 615 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 PSMD10O75832 226 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 RHOBTB3O94955 611 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 KIF20AO95235 890 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 MYCLP12524 364 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 PNLIPP16233 465 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CYP2B6P20813 491 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CDK11BP21127 795 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms