RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 STAT5BP51692 787 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 PTP4A2Q12974 167 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 TRIM72Q6ZMU5 477 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 CEP128Q6ZU80 1094 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 PXYLP1Q8TE99 480 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
AFF3-215ENST00000498090 RAPGEF5Q92565 580 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 TATDN2Q93075 761 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 CABS1Q96KC9 395 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
AFF3-215ENST00000498090 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 EPB41L4BQ9H329 900 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 C1orf112Q9NSG2 853 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
AFF3-215ENST00000498090 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 H0YHG0 523 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 OATP04181 439 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 ZNF286BP0CG31 522 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 MARK3P27448 753 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 RPL21P46778 160 aaKnown RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 PRMT2P55345 433 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 CLDN10P78369 228 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 FAM160B1Q5W0V3 765 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 ADAT2Q7Z6V5 191 aaKnown RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 SEMA4DQ92854 862 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
AFF3-215ENST00000498090 CNOT8Q9UFF9 292 aaKnown RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 SEPT9Q9UHD8 586 aaPredicted RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
AFF3-215ENST00000498090 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 A6NJR5 290 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 ANKRD63C9JTQ0 380 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 ASAP2O43150 1006 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SEPT4O43236 478 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 RIPK2O43353 540 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 CAND2O75155 1236 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 GAS8O95995 478 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 RARAP10276 462 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 GHRP10912 638 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 CENPCQ03188 943 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 PPP1R7Q15435 360 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SIX1Q15475 284 aaPredicted RBP13.22□□□□□ -0.29
AFF3-215ENST00000498090 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 TNFAIP8L3Q5GJ75 292 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 ICE2Q659A1 982 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 TTC27Q6P3X3 843 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 PLPPR4Q7Z2D5 763 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 CPLX4Q7Z7G2 160 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 PSPC1Q8WXF1 523 aaKnown RBP13.22□□□□□ -0.29
AFF3-215ENST00000498090 KAT5Q92993 513 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
AFF3-215ENST00000498090 CCDC127Q96BQ5 260 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 VCPIP1Q96JH7 1222 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 Q9Y3F1 56 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 CAPN7Q9Y6W3 813 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 WDR81Q562E7 1941 aa13.22□□□□□ -0.29
AFF3-215ENST00000498090 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 EXTL3O43909 919 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
AFF3-215ENST00000498090 INHAP05111 366 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 UNGP13051 313 aaPredicted RBP13.21□□□□□ -0.29
AFF3-215ENST00000498090 TMOD1P28289 359 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 MARCKSL1P49006 195 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 BEX3Q00994 111 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 IFT88Q13099 833 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 LACTB2Q53H82 288 aaPredicted RBP13.21□□□□□ -0.29
AFF3-215ENST00000498090 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.29
AFF3-215ENST00000498090 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 C15orf39Q6ZRI6 1047 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 TAS1R2Q8TE23 839 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 SAAL1Q96ER3 474 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 SERPINB12Q96P63 405 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
AFF3-215ENST00000498090 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 AZI2Q9H6S1 392 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 ATP6V0A4Q9HBG4 840 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 ARID2Q68CP9 1835 aa13.21□□□□□ -0.29
AFF3-215ENST00000498090 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.3
AFF3-215ENST00000498090 PSTPIP1O43586 416 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms