RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CCDC150Q8NCX0 1101 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 RNF214Q8ND24 703 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 C3orf58Q8NDZ4 430 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 FBXL13Q8NEE6 735 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 CXorf38Q8TB03 319 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 GDPD5Q8WTR4 605 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 VPS16Q9H269 839 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 HSD3B7Q9H2F3 369 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 ALG13Q9NP73 1137 aaKnown RBP21.54■■□□□ 1.04
CTSD-206ENST00000497544 TAB2Q9NYJ8 693 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 ZFHX2Q9C0A1 2572 aaPredicted RBP21.53■■□□□ 1.04
CTSD-206ENST00000497544 TECTAO75443 2155 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 GRXCR2A6NFK2 248 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 H3BNC9 293 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 P4HA2O15460 535 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 VNN1O95497 513 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 MYL7Q01449 175 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 SGSM1Q2NKQ1 1148 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 SCARA3Q6AZY7 606 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 CD300LGQ6UXG3 332 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 DDX53Q86TM3 631 aaKnown RBP21.53■■□□□ 1.04
CTSD-206ENST00000497544 TAS1R2Q8TE23 839 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 BCL7CQ8WUZ0 217 aaPredicted RBP21.53■■□□□ 1.04
CTSD-206ENST00000497544 IMPG2Q9BZV3 1241 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 NDST4Q9H3R1 872 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 RAB20Q9NX57 234 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 LMCD1Q9NZU5 365 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 STK39Q9UEW8 545 aa21.53■■□□□ 1.04
CTSD-206ENST00000497544 LIMA1Q9UHB6 759 aaKnown RBP21.53■■□□□ 1.04
CTSD-206ENST00000497544 SF3B1O75533 1304 aaKnown RBP eCLIP21.53■■□□□ 1.041e-9■■■■■ 100.5
CTSD-206ENST00000497544 KPNA7A9QM74 516 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 PMM2O15305 246 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 ATP1A3P13637 1013 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 UBE3AQ05086 875 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 BMS1Q14692 1282 aaKnown RBP21.52■■□□□ 1.04
CTSD-206ENST00000497544 TIGD5Q53EQ6 642 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 SPPL3Q8TCT6 385 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 POF1BQ8WVV4 589 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 SUSD3Q96L08 255 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 SENP8Q96LD8 212 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 GPR62Q9BZJ7 368 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 LZTS1Q9Y250 596 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 COQ4Q9Y3A0 265 aa21.52■■□□□ 1.04
CTSD-206ENST00000497544 KMT2EQ8IZD2 1858 aa21.52■■□□□ 1.03
CTSD-206ENST00000497544 ARHGEF37A1IGU5 675 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 LRRC10BA6NIK2 292 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 I3L4J1 428 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 SPTLC1O15269 473 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 COPB1P53618 953 aaKnown RBP21.51■■□□□ 1.03
CTSD-206ENST00000497544 ZNF699Q32M78 642 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 ZNF667Q5HYK9 610 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 WDR44Q5JSH3 913 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 MIIPQ5JXC2 388 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 IER5LQ5T953 404 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 FAM171A1Q5VUB5 890 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 KIAA1841Q6NSI8 718 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 CEP57Q86XR8 500 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 VPS52Q8N1B4 723 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 TAF4BQ92750 862 aa21.51■■□□□ 1.03
CTSD-206ENST00000497544 CYB561D2O14569 222 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 GRM6O15303 877 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 STAU1O95793 577 aaKnown RBP21.5■■□□□ 1.03
CTSD-206ENST00000497544 SOD2P04179 222 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 AARSP49588 968 aaKnown RBP eCLIP21.5■■□□□ 1.03
CTSD-206ENST00000497544 TCF15Q12870 199 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 USP41Q3LFD5 358 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 WDR72Q3MJ13 1102 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 FILIP1LQ4L180 1135 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 SEMA4DQ92854 862 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 PI4K2AQ9BTU6 479 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 XYLT2Q9H1B5 865 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 PCDHB8Q9UN66 801 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 SNX9Q9Y5X1 595 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 MYO15AQ9UKN7 3530 aa21.5■■□□□ 1.03
CTSD-206ENST00000497544 PLXNA4Q9HCM2 1894 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 M0QZQ0 153 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 HUS1O60921 280 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 SERPINC1P01008 464 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 TNNC1P63316 161 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 FKBP15Q5T1M5 1219 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 GBP6Q6ZN66 633 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 TAS1R1Q7RTX1 841 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 TMC7Q7Z402 723 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 GAS2L3Q86XJ1 694 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 EHBP1Q8NDI1 1231 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 APPL2Q8NEU8 664 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 MICAL1Q8TDZ2 1067 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 MMS19Q96T76 1030 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 TTPALQ9BTX7 342 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 HERC2P3Q9BVR0 1158 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 VRTNQ9H8Y1 702 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.49■■□□□ 1.03
CTSD-206ENST00000497544 GDAP2Q9NXN4 497 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 NXF1Q9UBU9 619 aaKnown RBP21.49■■□□□ 1.03
CTSD-206ENST00000497544 PLXNA3P51805 1871 aa21.49■■□□□ 1.03
CTSD-206ENST00000497544 GTPBP10A4D1E9 387 aaKnown RBP21.48■■□□□ 1.03
CTSD-206ENST00000497544 SYN3O14994 580 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 ASS1P00966 412 aaKnown RBP21.48■■□□□ 1.03
CTSD-206ENST00000497544 ODC1P11926 461 aa21.48■■□□□ 1.03
CTSD-206ENST00000497544 P4HA1P13674 534 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms