RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 FDX2Q6P4F2 183 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NFRKBQ6P4R8 1299 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 C8orf86Q6ZUL3 223 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 KCTD1Q719H9 257 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 GAREM2Q75VX8 874 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 MIGA2Q7L4E1 593 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 DYMQ7RTS9 669 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ANKS1BQ7Z6G8 1248 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PXKQ7Z7A4 578 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NBPF11Q86T75 865 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PRPF39Q86UA1 669 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 TSPYL5Q86VY4 417 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 CHD1LQ86WJ1 897 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PPP1R3BQ86XI6 285 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 FAM90A1Q86YD7 464 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ERC1Q8IUD2 1116 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 CREG2Q8IUH2 290 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NPAS3Q8IXF0 933 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 DZIP1LQ8IYY4 767 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 NLGN4XQ8N0W4 816 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PLD6Q8N2A8 252 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 VGLL2Q8N8G2 317 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ARL10Q8N8L6 244 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 GLB1L3Q8NCI6 653 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 C3orf20Q8ND61 904 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 TMEM52Q8NDY8 209 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NLGN2Q8NFZ4 835 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 OR14C36Q8NHC7 312 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 GIMAP7Q8NHV1 300 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ZNF417Q8TAU3 575 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 IFI44Q8TCB0 444 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PLEKHO2Q8TD55 490 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 SLC22A17Q8WUG5 538 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ATP2A3Q93084 1043 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 FATE1Q969F0 183 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 RAB24Q969Q5 203 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 LRRC59Q96AG4 307 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 TBC1D31Q96DN5 1066 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 TRIM11Q96F44 468 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 SUCLG2Q96I99 432 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 COX4I2Q96KJ9 171 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 TIGD1Q96MW7 591 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 JAKMIP1Q96N16 626 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 ZNF587Q96SQ5 575 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 FOXB1Q99853 325 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NCAPGQ9BPX3 1015 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 MXD3Q9BW11 206 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 COL25A1Q9BXS0 654 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 OSBPL6Q9BZF3 934 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 GPR62Q9BZJ7 368 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 HAPLN2Q9GZV7 340 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 RNF208Q9H0X6 261 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ASCC2Q9H1I8 757 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 OR10A4Q9H209 315 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ZWILCHQ9H900 591 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 G6PC2Q9NQR9 355 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PRDM5Q9NQX1 630 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 KRT84Q9NSB2 600 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 RXFP3Q9NSD7 469 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 AP5S1Q9NUS5 200 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 HAUS2Q9NVX0 235 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.14□□□□□ -2.07
UBR4-217ENST00000497018 TRMT1Q9NXH9 659 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 BTBD7Q9P203 1132 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 WDR35Q9P2L0 1181 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PI4KBQ9UBF8 816 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 FBLN5Q9UBX5 448 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ABCF2Q9UG63 623 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 CPA4Q9UI42 421 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 HERC5Q9UII4 1024 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 AJAP1Q9UKB5 411 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 DSEQ9UL01 958 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 MAFFQ9ULX9 164 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 TBX20Q9UMR3 447 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ARHGAP26Q9UNA1 814 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 MED16Q9Y2X0 877 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 SH3BP1Q9Y3L3 701 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ASB1Q9Y576 335 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PCDHGB5Q9Y5G0 923 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 PCDHA3Q9Y5H8 950 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 HS3ST4Q9Y661 456 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 CYP46A1Q9Y6A2 500 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 CAPN6Q9Y6Q1 641 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 ZFP37Q9Y6Q3 630 aaPredicted RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 ABCC5O15440 1437 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 WRNQ14191 1432 aaPredicted RBP eCLIP2.14□□□□□ -2.07
UBR4-217ENST00000497018 SCAPERQ9BY12 1400 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 SETD5Q9C0A6 1442 aa2.14□□□□□ -2.07
UBR4-217ENST00000497018 NKTRP30414 1462 aaKnown RBP2.14□□□□□ -2.07
UBR4-217ENST00000497018 MROH1Q8NDA8 1641 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TNRQ92752 1358 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MAP3K5Q99683 1374 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ST20-MTHFSA0A0A6YYL1 179 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 hCG_1807616A0A1W2PRN6 198 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TMEM82A0PJX8 343 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MBD3L4A6NDZ8 208 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 MBD3L3A6NE82 208 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 TRIM64CA6NLI5 447 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PRR33A8MZF0 331 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms