RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 PDLIM2Q96JY6 352 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 SUSD3Q96L08 255 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 FAM81BQ96LP2 452 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 EDEM3Q9BZQ6 932 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 SDCBP2Q9H190 292 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 NLRC4Q9NPP4 1024 aa14.96□□□□□ -0.01
ATPAF2-208ENST00000496852 LAMA2P24043 3122 aaKnown RBP14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 A0A1W2PQJ5 194 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 I3L4J1 428 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 RNF225M0QZC1 329 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 TADA2AO75478 443 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 ARHGEF15O94989 841 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 MFAP3P55082 362 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 TRIM14Q14142 442 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 SOWAHAQ2M3V2 549 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 SCARA5Q6ZMJ2 495 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 ENOSF1Q7L5Y1 443 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 DPH6Q7L8W6 267 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 TOP6BLQ8N6T0 577 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 TRIM44Q96DX7 344 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 GPR88Q9GZN0 384 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 SMYD3Q9H7B4 428 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 CYP3A43Q9HB55 503 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 AAASQ9NRG9 546 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 L1RE1Q9UN81 338 aa14.95□□□□□ -0.02
ATPAF2-208ENST00000496852 COL4A4P53420 1690 aaPredicted RBP14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 CYB561D2O14569 222 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 PBX2P40425 430 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 RAP1GAPP47736 663 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 CDH8P55286 799 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 JAM2P57087 298 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 ARHGAP44Q17R89 818 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 FUT10Q6P4F1 479 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 DSTYKQ6XUX3 929 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 CCDC186Q7Z3E2 898 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 RNF168Q8IYW5 571 aaPredicted RBP14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 APPL2Q8NEU8 664 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 BAP1Q92560 729 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 PBX4Q9BYU1 374 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 GPR62Q9BZJ7 368 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 FAM124BQ9H5Z6 455 aaPredicted RBP14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 SPG21Q9NZD8 308 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 CAPN11Q9UMQ6 739 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 YBX2Q9Y2T7 364 aaKnown RBP14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 PCDHB12Q9Y5F1 795 aa14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 RANBP2P49792 3224 aaKnown RBP14.94□□□□□ -0.02
ATPAF2-208ENST00000496852 SF3B1O75533 1304 aaKnown RBP eCLIP14.94□□□□□ -0.021e-7■■■■■ 172.3
ATPAF2-208ENST00000496852 TRAPPC3O43617 180 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 HUS1O60921 280 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 TACC1O75410 805 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CYP11A1P05108 521 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CA3P07451 260 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 WEE2P0C1S8 567 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 FAM163BP0C2L3 166 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 ACO1P21399 889 aaKnown RBP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CASP14P31944 242 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 PPM1AP35813 382 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 DRAP1Q14919 205 aaPredicted RBP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CACNA2D4Q7Z3S7 1137 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 PDCL2Q8N4E4 241 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 KBTBD7Q8WVZ9 684 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 SHC3Q92529 594 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 VN1R3Q9BXE9 311 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 STK33Q9BYT3 514 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 IMPACTQ9P2X3 320 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 PCDHB8Q9UN66 801 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 MTCL1Q9Y4B5 1905 aaKnown RBP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 ODC1P11926 461 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 TYMPP19971 482 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 BMPR1AP36894 532 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 GOLGA8FQ08AF8 430 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 GOLGA8DPQ0D2H9 430 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 ELAVL2Q12926 359 aaKnown RBP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 WSCD1Q658N2 575 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 SMYD5Q6GMV2 418 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 TMEM169Q96HH4 297 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 MRPL45Q9BRJ2 306 aaKnown RBP14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CISHQ9NSE2 258 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 CNTN6Q9UQ52 1028 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 MYO9BQ13459 2157 aa14.93□□□□□ -0.02
ATPAF2-208ENST00000496852 ARHGEF37A1IGU5 675 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 C5orf67F2Z3F1 127 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 F8VZ95 297 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 FOXN3O00409 490 aaPredicted RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 GABRDO14764 452 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 SYN3O14994 580 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 CD58P19256 250 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 FGFR3P22607 806 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 WARSP23381 471 aaKnown RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 TKTP29401 623 aaKnown RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 YWHAEP62258 255 aaKnown RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 ZBED6P86452 979 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms