RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
HLA-A-208ENST00000496081 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
HLA-A-208ENST00000496081 NOMO3P69849 1222 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 TRIM71Q2Q1W2 868 aaKnown RBP17.47■□□□□ 0.39
HLA-A-208ENST00000496081 CTAGE6Q86UF2 777 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 PASD1Q8IV76 773 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 CTAGE4Q8IX94 777 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 MCOLN2Q8IZK6 566 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 AGO3Q9H9G7 860 aaKnown RBP17.47■□□□□ 0.39
HLA-A-208ENST00000496081 CYP3A43Q9HB55 503 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 UBQLN1Q9UMX0 589 aaKnown RBP17.47■□□□□ 0.39
HLA-A-208ENST00000496081 NOD1Q9Y239 953 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 SCN1AP35498 2009 aa17.47■□□□□ 0.39
HLA-A-208ENST00000496081 PDE2AO00408 941 aaPredicted RBP17.46■□□□□ 0.39
HLA-A-208ENST00000496081 MTA2O94776 668 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 KCNE1P15382 129 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 MYO1EQ12965 1108 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 FBXO47Q5MNV8 452 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 PEX26Q7Z412 305 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 NT5DC3Q86UY8 548 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 TFAP2BQ92481 460 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 ANKRD7Q92527 254 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 GOLGA1Q92805 767 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 CALR3Q96L12 384 aaKnown RBP17.46■□□□□ 0.39
HLA-A-208ENST00000496081 TSPAN18Q96SJ8 248 aa17.46■□□□□ 0.39
HLA-A-208ENST00000496081 GPR182O15218 404 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 CILPO75339 1184 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 KIF4AO95239 1232 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 NSFP46459 744 aaKnown RBP17.45■□□□□ 0.38
HLA-A-208ENST00000496081 DNA2P51530 1060 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 RAD23BP54727 409 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 CKAP4Q07065 602 aaKnown RBP17.45■□□□□ 0.38
HLA-A-208ENST00000496081 RPS6KA1Q15418 735 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 PTPROQ16827 1216 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 TEX35Q5T0J7 233 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 SH3TC2Q8TF17 1288 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
HLA-A-208ENST00000496081 BRCA2P51587 3418 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 A0A1W2PQ45 241 aaPredicted RBP17.45■□□□□ 0.38
HLA-A-208ENST00000496081 A0A1W2PQY0 241 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 TNNC1P63316 161 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 FAM26DQ5JW98 314 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 MON1BQ7L1V2 547 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 LRRC52Q8N7C0 313 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 TWNKQ96RR1 684 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 NUP85Q9BW27 656 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 ERVK-5Q9HDB9 667 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 FAM105AQ9NUU6 356 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 HMGXB4Q9UGU5 601 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 PADI3Q9ULW8 664 aa17.45■□□□□ 0.38
HLA-A-208ENST00000496081 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 CD4P01730 458 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 PAEPP09466 180 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 GHRP10912 638 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 CD52P31358 61 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 C2CD6Q53TS8 623 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 C11orf63Q6NUN7 778 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 PHF13Q86YI8 300 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 SLC43A3Q8NBI5 491 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 SLC4A11Q8NBS3 891 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 ZNF564Q8TBZ8 553 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 TRIM11Q96F44 468 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 HES6Q96HZ4 224 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 ELOVL4Q9GZR5 314 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 AVENQ9NQS1 362 aaPredicted RBP17.44■□□□□ 0.38
HLA-A-208ENST00000496081 UVRAGQ9P2Y5 699 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 AMFRQ9UKV5 643 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 PCDHGC3Q9UN70 934 aa17.44■□□□□ 0.38
HLA-A-208ENST00000496081 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PIRO00625 290 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 XPOTO43592 962 aaKnown RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 MYBL1P10243 752 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 RRM1P23921 792 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 SOX4Q06945 474 aaPredicted RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 INCA1Q0VD86 236 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PTP4A2Q12974 167 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ORC1Q13415 861 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 LPIN1Q14693 890 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 VCPIP1Q96JH7 1222 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 C11orf70Q9BRQ4 267 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 BARX2Q9UMQ3 279 aaPredicted RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ALG6Q9Y672 507 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PTGESO14684 152 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 LSM8O95777 96 aaKnown RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 CD19P15391 556 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 CYP3A5P20815 502 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms