RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ADAM12O43184 909 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 EXOC3O60645 756 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 ABLIM3O94929 683 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 HNRNPA1P09651 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
MRPL55-233ENST00000495899 ODC1P11926 461 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 HOXA9P31269 272 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 TAF6P49848 677 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CYP2J2P51589 502 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 WNT7BP56706 349 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 RBP5P82980 135 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 PSMD6Q15008 389 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 SV2CQ496J9 727 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CTXN3Q4LDR2 81 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 TPGS2Q68CL5 300 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 ZNF280DQ6N043 979 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CCDC149Q6ZUS6 474 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 USP37Q86T82 979 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 GUF1Q8N442 669 aaKnown RBP13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 LRRC52Q8N7C0 313 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 SPATA20Q8TB22 786 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 ZNF560Q96MR9 790 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 CD320Q9NPF0 282 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 DMAC2Q9NW81 257 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 FBXL5Q9UKA1 691 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 LHX6Q9UPM6 363 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 TRAF3IP3Q9Y228 551 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
MRPL55-233ENST00000495899 OR6C75A6NL08 312 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CALUO43852 315 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-233ENST00000495899 TNNC2P02585 160 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CYP11A1P05108 521 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 POU2F2P09086 479 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 TMEM191BP0C7N4 346 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 ATF2P15336 505 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 PNOCQ13519 176 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 NFIL3Q16649 462 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 RDH13Q8NBN7 331 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CXorf38Q8TB03 319 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 POMKQ9H5K3 350 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 AGAP1Q9UPQ3 857 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CUL9Q8IWT3 2517 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CITO14578 2027 aa13.34□□□□□ -0.27
MRPL55-233ENST00000495899 CYB561D2O14569 222 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 MAP3K7O43318 606 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 RFPL2O75678 378 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 NR3C1P04150 777 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 ITGB3P05106 788 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 C8AP07357 584 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 ELF1P32519 619 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 AP3M2P53677 418 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 ROR1Q01973 937 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 ZNF658Q5TYW1 1059 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 SMG7Q92540 1137 aaKnown RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 ZNF707Q96C28 371 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 RPGRIP1Q96KN7 1286 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 WDR6Q9NNW5 1121 aaKnown RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 PCDHA5Q9Y5H7 936 aa13.33□□□□□ -0.28
MRPL55-233ENST00000495899 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-233ENST00000495899 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 MAPK13O15264 365 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 GPR37O15354 613 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 XYLBO75191 536 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 GADD45BO75293 160 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-233ENST00000495899 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 ALADP13716 330 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 TNNI1P19237 187 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 RPL13P26373 211 aaKnown RBP13.32□□□□□ -0.28
MRPL55-233ENST00000495899 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
MRPL55-233ENST00000495899 UBE2HP62256 183 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 CLDN10P78369 228 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 GPR17Q13304 367 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 OTOP3Q7RTS5 596 aa13.32□□□□□ -0.28
MRPL55-233ENST00000495899 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms