RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ARPP19P56211 112 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 CREMQ03060 361 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 YWHAHQ04917 246 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-212ENST00000495497 MYO1EQ12965 1108 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 NCOA4Q13772 614 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 CLUL1Q15846 466 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 CTXN3Q4LDR2 81 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 OVOS1Q6IE37 1185 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 C11orf57Q6ZUT1 292 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-212ENST00000495497 FRMD5Q7Z6J6 570 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.9■□□□□ 0.94
HDAC4-212ENST00000495497 FBXL5Q9UKA1 691 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 L1RE1Q9UN81 338 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 BACE2Q9Y5Z0 518 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 H7C4K7 107 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 TGM5O43548 720 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 LRRN2O75325 713 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 SLC34A2O95436 690 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 HLA-DRAP01903 254 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 ENPEPQ07075 957 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 ZNF280DQ6N043 979 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 TAS1R2Q8TE23 839 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 SYAP1Q96A49 352 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-212ENST00000495497 APOL5Q9BWW9 433 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 XYLT2Q9H1B5 865 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 GDAP2Q9NXN4 497 aa20.89■□□□□ 0.93
HDAC4-212ENST00000495497 HUS1O60921 280 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 CLSTN1O94985 981 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 OAZ2O95190 189 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 CYP11A1P05108 521 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 OR4Q2P0C623 313 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 ERCC5P28715 1186 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-212ENST00000495497 STX1AQ16623 288 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 TPD52L1Q16890 204 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-212ENST00000495497 TMEM184AQ6ZMB5 413 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 PPFIBP1Q86W92 1011 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 METTL23Q86XA0 190 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 CREBRFQ8IUR6 639 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 PDCL2Q8N4E4 241 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 C12orf76Q8N812 135 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-212ENST00000495497 FEZF2Q8TBJ5 459 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 CASP10Q92851 521 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 SLC35C1Q96A29 364 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 TMEM209Q96SK2 561 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 RTP3Q9BQQ7 232 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 PI4K2AQ9BTU6 479 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 METTL14Q9HCE5 456 aaKnown RBP20.88■□□□□ 0.93
HDAC4-212ENST00000495497 TMEM8AQ9HCN3 771 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 NXF1Q9UBU9 619 aaKnown RBP20.88■□□□□ 0.93
HDAC4-212ENST00000495497 POLIQ9UNA4 740 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 COG5Q9UP83 839 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 XIRP2A4UGR9 3374 aa20.88■□□□□ 0.93
HDAC4-212ENST00000495497 GLUD1P00367 558 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 PIK3CAP42336 1068 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 CDR1P51861 262 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 ROR1Q01973 937 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 TYRO3Q06418 890 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 RAB33AQ14088 237 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 SOWAHAQ2M3V2 549 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 ZNF699Q32M78 642 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 WDR72Q3MJ13 1102 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 CBWD6Q4V339 395 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 HSP90AA4PQ58FG1 418 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 CBWD3Q5JTY5 395 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 CBWD5Q5RIA9 395 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 KRT39Q6A163 491 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 SPOPLQ6IQ16 392 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 SLC8B1Q6J4K2 584 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 ANKRD54Q6NXT1 300 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 LILRA6Q6PI73 481 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 OSTM1Q86WC4 334 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 IRF2BP1Q8IU81 584 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 MMS19Q96T76 1030 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 ANO10Q9NW15 660 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 THEGQ9P2T0 379 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 DSEQ9UL01 958 aa20.87■□□□□ 0.93
HDAC4-212ENST00000495497 WDR27A2RRH5 827 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 HCRTO43612 131 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 STX10O60499 249 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 FGFR1OPO95684 399 aaKnown RBP20.86■□□□□ 0.93
HDAC4-212ENST00000495497 GNA14O95837 355 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 ATICP31939 592 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 GTF2H1P32780 548 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 MXI1P50539 228 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 NFKBIBQ15653 356 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 TOP6BLQ8N6T0 577 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 OR10T2Q8NGX3 314 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 SEMA4DQ92854 862 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 MSLNLQ96KJ4 702 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 CNOT6LQ96LI5 555 aaKnown RBP20.86■□□□□ 0.93
HDAC4-212ENST00000495497 DNAJC25Q9H1X3 360 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 MAN1C1Q9NR34 630 aa20.86■□□□□ 0.93
HDAC4-212ENST00000495497 ARHGEF37A1IGU5 675 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 FSD2A1L4K1 749 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 STAU1O95793 577 aaKnown RBP20.85■□□□□ 0.93
HDAC4-212ENST00000495497 SRGAP2BP0DMP2 458 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 CPB1P15086 417 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 MARSP56192 900 aaKnown RBP20.85■□□□□ 0.93
HDAC4-212ENST00000495497 TNNC1P63316 161 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 SGSM1Q2NKQ1 1148 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms