RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 PUF60Q9UHX1 559 aaKnown RBP11.86□□□□□ -0.51
KDM1A-205ENST00000494920 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
KDM1A-205ENST00000494920 NME7Q9Y5B8 376 aa11.86□□□□□ -0.51
KDM1A-205ENST00000494920 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
KDM1A-205ENST00000494920 GABRDO14764 452 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 ADAM12O43184 909 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 N4BP1O75113 896 aaKnown RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 KRT19P08727 400 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 ASPAP45381 313 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 MYL7Q01449 175 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 SMC1AQ14683 1233 aaKnown RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 ZNF699Q32M78 642 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 PLPP4Q5VZY2 271 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 PDE12Q6L8Q7 609 aaKnown RBP11.85□□□□□ -0.51
KDM1A-205ENST00000494920 LUZP1Q86V48 1076 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 SPATA18Q8TC71 538 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 TAF4BQ92750 862 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 TUBGCP2Q9BSJ2 902 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 PI4K2AQ9BTU6 479 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 SDCBP2Q9H190 292 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 RAB20Q9NX57 234 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 NCOR1O75376 2440 aa11.85□□□□□ -0.51
KDM1A-205ENST00000494920 GTPBP10A4D1E9 387 aaKnown RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 CYB561D2O14569 222 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TEX28O15482 410 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TACC1O75410 805 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 URODP06132 367 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 FAM163BP0C2L3 166 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 ODC1P11926 461 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 MYO1EQ12965 1108 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TRPC3Q13507 836 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 PSMD5Q16401 504 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 PTPROQ16827 1216 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 SLC8B1Q6J4K2 584 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TMC7Q7Z402 723 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 UBR7Q8N806 425 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 FAXDC2Q96IV6 333 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 PKMYT1Q99640 499 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 NDST4Q9H3R1 872 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 NSUN3Q9H649 340 aaKnown RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 TIMM13Q9Y5L4 95 aaPredicted RBP11.84□□□□□ -0.51
KDM1A-205ENST00000494920 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
KDM1A-205ENST00000494920 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 PHACTR2O75167 634 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 VNN2O95498 520 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 CXCL14O95715 111 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 C1RP00736 705 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 DUSP6Q16828 381 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 VWA3BQ502W6 1294 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 DSTYKQ6XUX3 929 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 TMEM86AQ8N2M4 240 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 VN1R2Q8NFZ6 395 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 OR10T2Q8NGX3 314 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 TATDN2Q93075 761 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 KLHL5Q96PQ7 755 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 SMYD3Q9H7B4 428 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 MRPL17Q9NRX2 175 aaKnown RBP11.83□□□□□ -0.52
KDM1A-205ENST00000494920 TAB2Q9NYJ8 693 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 FBXL5Q9UKA1 691 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 DSEQ9UL01 958 aa11.83□□□□□ -0.52
KDM1A-205ENST00000494920 TTC28Q96AY4 2481 aa11.82□□□□□ -0.52
KDM1A-205ENST00000494920 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
KDM1A-205ENST00000494920 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
KDM1A-205ENST00000494920 HCRTO43612 131 aa11.82□□□□□ -0.52
KDM1A-205ENST00000494920 CLASP2O75122 1294 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms