RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 KRT19P08727 400 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 POLR2BP30876 1174 aaKnown RBP19.03■□□□□ 0.64
HDAC4-211ENST00000494800 RBP5P82980 135 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 ADCY1Q08828 1119 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 STK4Q13043 487 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 DUOXA2Q1HG44 320 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 TRIM67Q6ZTA4 783 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 CBWD2Q8IUF1 395 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 C12orf56Q8IXR9 622 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 CSGALNACT2Q8N6G5 542 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 LRRC52Q8N7C0 313 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 IGSF9Q9P2J2 1179 aa19.03■□□□□ 0.64
HDAC4-211ENST00000494800 EXOC3O60645 756 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 SIGLEC14Q08ET2 396 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 MYO1EQ12965 1108 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 PLD1Q13393 1074 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 PABPC1LQ4VXU2 614 aaKnown RBP19.02■□□□□ 0.64
HDAC4-211ENST00000494800 IQCEQ6IPM2 695 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 WDR49Q8IV35 697 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 C1orf127Q8N9H9 656 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 RDH13Q8NBN7 331 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 NXPE3Q969Y0 559 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 MTMR12Q9C0I1 747 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 GOLPH3LQ9H4A5 285 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 EPS15L1Q9UBC2 864 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 INSL5Q9Y5Q6 135 aa19.02■□□□□ 0.64
HDAC4-211ENST00000494800 MTCL1Q9Y4B5 1905 aaKnown RBP19.02■□□□□ 0.63
HDAC4-211ENST00000494800 HUS1O60921 280 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 PTPN2P17706 415 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 TNNI1P19237 187 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 WNT7BP56706 349 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 BFSP1Q12934 665 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 GPR17Q13304 367 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 RNF19BQ6ZMZ0 732 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 KIAA0895Q8NCT3 520 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 HOOK1Q9UJC3 728 aaKnown RBP19.01■□□□□ 0.63
HDAC4-211ENST00000494800 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-211ENST00000494800 HCN4Q9Y3Q4 1203 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 DENND4AQ7Z401 1863 aa19.01■□□□□ 0.63
HDAC4-211ENST00000494800 TMEM221A6NGB7 291 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 M0R296 226 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 RHOBTB3O94955 611 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 ASGR2P07307 311 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 DLATP10515 647 aaKnown RBP19■□□□□ 0.63
HDAC4-211ENST00000494800 CYP24A1Q07973 514 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 SMARCB1Q12824 385 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 DPYDQ12882 1025 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 TDGQ13569 410 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 PSMD6Q15008 389 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 MFSD14AQ96MC6 490 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 ZNF512Q96ME7 567 aaPredicted RBP19■□□□□ 0.63
HDAC4-211ENST00000494800 MYADMQ96S97 322 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 KCNK12Q9HB15 430 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 CDH7Q9ULB5 785 aa19■□□□□ 0.63
HDAC4-211ENST00000494800 PDXKO00764 312 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 ZNF197O14709 1029 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 N4BP1O75113 896 aaKnown RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 SEC24AO95486 1093 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 OR4Q2P0C623 313 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 LAMP2P13473 410 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 COL9A1P20849 921 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 ALDH1A3P47895 512 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 TWF1Q12792 350 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 KCNB1Q14721 858 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 CYP4A22Q5TCH4 519 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 LMBRD2Q68DH5 695 aaPredicted RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 TMEM86AQ8N2M4 240 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 LEMD2Q8NC56 503 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 C2orf15Q8WU43 125 aaKnown RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 CCDC127Q96BQ5 260 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 PGLYRP2Q96PD5 576 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 CGRRF1Q99675 332 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 RMND1Q9NWS8 449 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 HCFC1R1Q9NWW0 138 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 DNMT3BQ9UBC3 853 aaKnown RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 HSFX1Q9UBD0 423 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 MRPS23Q9Y3D9 190 aaKnown RBP18.99■□□□□ 0.63
HDAC4-211ENST00000494800 C2orf16Q68DN1 1984 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 ANK1P16157 1881 aa18.99■□□□□ 0.63
HDAC4-211ENST00000494800 RHOP08100 348 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 PRR29P0C7W0 189 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 EPHB3P54753 998 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 NTHL1P78549 312 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 TSPY1Q01534 308 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 FAM160A1Q05DH4 1040 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 WSCD1Q658N2 575 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 MTSS1LQ765P7 747 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 PDZD4Q76G19 769 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-211ENST00000494800 DCP1BQ8IZD4 617 aaKnown RBP18.98■□□□□ 0.63
HDAC4-211ENST00000494800 FMR1NBQ8N0W7 255 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-211ENST00000494800 SPATA18Q8TC71 538 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 PBXIP1Q96AQ6 731 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 BORCS6Q96GS4 357 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 HPDLQ96IR7 371 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 CORO1BQ9BR76 489 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 AVENQ9NQS1 362 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-211ENST00000494800 GDAP2Q9NXN4 497 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms