RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 PPTC7Q8NI37 304 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 IPO4Q8TEX9 1081 aaKnown RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TMEM40Q8WWA1 233 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 SH3GL2Q99962 352 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 CACNG4Q9UBN1 327 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TTC7AQ9ULT0 858 aaPredicted RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 ATP8A1Q9Y2Q0 1164 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TRIP12Q14669 1992 aaPredicted RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 GTF2A2P52657 109 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TRPC3Q13507 836 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 ACVR2BQ13705 512 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 LAMC2Q13753 1193 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 GRIK4Q16099 956 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 B4GALNT4Q76KP1 1039 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 EMC1Q8N766 993 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 C12orf29Q8N999 325 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 SHCBP1Q8NEM2 672 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 PIWIL1Q96J94 861 aaKnown RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 MCEEQ96PE7 176 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 RPS6KC1Q96S38 1066 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TINF2Q9BSI4 451 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 ZDHHC18Q9NUE0 388 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 GRHL1Q9NZI5 618 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 CNTN6Q9UQ52 1028 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 NME7Q9Y5B8 376 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 FOXO6A8MYZ6 492 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 H0YGN5 161 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KIAA0391O15091 583 aaKnown RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TLR3O15455 904 aaKnown RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CTNNA2P26232 953 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CTGFP29279 349 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 GRB14Q14449 540 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TCEAL1Q15170 157 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 DUPD1Q68J44 220 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KCNV1Q6PIU1 500 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 UBL4BQ8N7F7 174 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KCNN1Q92952 543 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 EPB41L4BQ9H329 900 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 SAE1Q9UBE0 346 aaPredicted RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 ANKRD65E5RJM6 399 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 GOLGA8SH3BPF8 625 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC188H7C350 402 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 MYO1FO00160 1098 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TSPAN1O60635 241 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 RALAP11233 206 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CD19P15391 556 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CAPN2P17655 700 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 PPFIA1Q13136 1202 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC142Q17RM4 750 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KAZNQ674X7 775 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 JOSD2Q8TAC2 188 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KAT2BQ92831 832 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 HAUS1Q96CS2 278 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 OSMRQ99650 979 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 ELOVL4Q9GZR5 314 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 NIF3L1Q9GZT8 377 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 RPF1Q9H9Y2 349 aaKnown RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 UVRAGQ9P2Y5 699 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TNFSF13BQ9Y275 285 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 SCN1AP35498 2009 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 GOLGA6CA6NDK9 693 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TULP2O00295 520 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 GOLGA6DP0CG33 693 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CYP2B6P20813 491 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 RWDD2BP57060 319 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TAF5Q15542 800 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CFAP58Q5T655 872 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 MAATS1Q7Z4T9 603 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 TMC3Q7Z5M5 1100 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
SAMM50-206ENST00000494795 ARFGAP1Q8N6T3 406 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 UBA3Q8TBC4 463 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 ERP44Q9BS26 406 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 MAF1Q9H063 256 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 GOLGA6AQ9NYA3 693 aa11.05□□□□□ -0.64
SAMM50-206ENST00000494795 CYP3A5P20815 502 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 MMP8P22894 467 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 AKAP5P24588 427 aa11.04□□□□□ -0.64
SAMM50-206ENST00000494795 HOXA11P31270 313 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms