RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 PIAS3Q9Y6X2 628 aa12.8□□□□□ -0.36
CSNK1E-212ENST00000494610 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 PRR5-ARHGAP8B1AHC4 643 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 PODXLO00592 558 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 NCAM2O15394 837 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 SMC2O95347 1197 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 ADRB1P08588 477 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 CHRNB1P11230 501 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 CYP11B2P19099 503 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 NAMPTP43490 491 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 ARHGAP8P85298 464 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 TWF1Q12792 350 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 KARSQ15046 597 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 TEAD2Q15562 447 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 TMEM119Q4V9L6 283 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 STXBP5Q5T5C0 1151 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 SLC8B1Q6J4K2 584 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 PDXDC1Q6P996 788 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 ANKS3Q6ZW76 656 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 TAS1R3Q7RTX0 852 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 PDILTQ8N807 584 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 LRRC3BQ96PB8 259 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 CDT1Q9H211 546 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 GMEB2Q9UKD1 530 aa12.79□□□□□ -0.36
CSNK1E-212ENST00000494610 AKAP13Q12802 2813 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ARHGEF35A5YM69 484 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 SLC38A8A6NNN8 435 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 VNN2O95498 520 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ATF2P15336 505 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 PLCG1P19174 1290 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ELF1P32519 619 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 MAGEA9P43362 315 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 SPAG1Q07617 926 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ST3GAL2Q16842 350 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 TXNDC11Q6PKC3 985 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 RNF19BQ6ZMZ0 732 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 PDZD4Q76G19 769 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ZSCAN18Q8TBC5 510 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 LARP4BQ92615 738 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 AVENQ9NQS1 362 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 KIF26AQ9ULI4 1882 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-212ENST00000494610 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
CSNK1E-212ENST00000494610 PP2D1A8MPX8 630 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 ARNTLO00327 626 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 PSMC3P17980 439 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 SIM2Q14190 667 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 MRPL58Q14197 206 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 POSTNQ15063 836 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 E2F4Q16254 413 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 ZSCAN23Q3MJ62 389 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 DCAF4L1Q3SXM0 396 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 RBM43Q6ZSC3 357 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 TCEAL8Q8IYN2 117 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 SMARCD2Q92925 531 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 BHMT2Q9H2M3 363 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 POLR3BQ9NW08 1133 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 TUBGCP4Q9UGJ1 667 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 DNM3Q9UQ16 869 aa12.77□□□□□ -0.37
CSNK1E-212ENST00000494610 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 CCDC169A6NNP5 214 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 K7ESF4 209 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 MAN2B1O00754 1011 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SLC30A4O14863 429 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 SOAT2O75908 522 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
CSNK1E-212ENST00000494610 GRM5P41594 1212 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms