RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
ERCC3-209ENST00000494464 GPD1LQ8N335 351 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 ZSWIM2Q8NEG5 633 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 HPS3Q969F9 1004 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 SENP8Q96LD8 212 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 SMOC2Q9H3U7 446 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 DPP3Q9NY33 737 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 POLIQ9UNA4 740 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 INSL5Q9Y5Q6 135 aa14.25□□□□□ -0.13
ERCC3-209ENST00000494464 PVALEFA0A1B0GWK0 134 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 ANHXE9PGG2 379 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 ACTN4O43707 911 aaKnown RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 KINO60870 393 aaKnown RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 HOXD13P35453 343 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 TAF6P49848 677 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 WNT7BP56706 349 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 NTHL1P78549 312 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 HTR4Q13639 388 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 MYBPC2Q14324 1141 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 BMT2Q1RMZ1 405 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 PABPC1LQ4VXU2 614 aaKnown RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 OVOS1Q6IE37 1185 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 CEP57L1Q8IYX8 460 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 FMR1NBQ8N0W7 255 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 ZNF507Q8TCN5 953 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 ZNF560Q96MR9 790 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 CYP4F11Q9HBI6 524 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 HCFC1R1Q9NWW0 138 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 USP25Q9UHP3 1055 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 DSEQ9UL01 958 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 CDH7Q9ULB5 785 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
ERCC3-209ENST00000494464 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-209ENST00000494464 SEC24AO95486 1093 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 PFKFB1P16118 471 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 CASP1P29466 404 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 PLA2G5P39877 138 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 PNPLA4P41247 253 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 SNRPFP62306 86 aaKnown RBP14.23□□□□□ -0.13
ERCC3-209ENST00000494464 ADCY1Q08828 1119 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 GPR17Q13304 367 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 CUL4BQ13620 913 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 SV2CQ496J9 727 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 SCFD1Q8WVM8 642 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 ANP32BQ92688 251 aaKnown RBP14.23□□□□□ -0.13
ERCC3-209ENST00000494464 FGF13Q92913 245 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 KIAA1586Q9HCI6 787 aa14.23□□□□□ -0.13
ERCC3-209ENST00000494464 GOLGA8IPA6NC78 632 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 GOLGA8JA6NMD2 632 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 TGFB1I1O43294 461 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 MYL1P05976 194 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 RHOP08100 348 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 AFMP43652 599 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 TFAMQ00059 246 aaKnown RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 RNF19BQ6ZMZ0 732 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 NPAS3Q8IXF0 933 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 LRRC52Q8N7C0 313 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 C1orf127Q8N9H9 656 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 ITFG1Q8TB96 612 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CACTINQ8WUQ7 758 aaKnown RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 TIGD1Q96MW7 591 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PCIF1Q9H4Z3 704 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 HSPBP1Q9NZL4 362 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CGNQ9P2M7 1197 aaKnown RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 ITGA11Q9UKX5 1188 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 YIPF1Q9Y548 306 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 A0A1B0GVL5 298 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 KPNA7A9QM74 516 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 VNN2O95498 520 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CAVIN2O95810 425 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PDGFBP01127 241 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 ITGB3P05106 788 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 SRFP11831 508 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PTPN2P17706 415 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 POLR2BP30876 1174 aaKnown RBP14.22□□□□□ -0.13
ERCC3-209ENST00000494464 NDUFA8P51970 172 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 TYRO3Q06418 890 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PLD1Q13393 1074 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 SURF1Q15526 300 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CAMK4Q16566 473 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PRSS36Q5K4E3 855 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 MTSS1LQ765P7 747 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 C12orf56Q8IXR9 622 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 ELMOD1Q8N336 334 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 LEMD2Q8NC56 503 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 CXorf38Q8TB03 319 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 RSAD2Q8WXG1 361 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 BORCS6Q96GS4 357 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PAGE5Q96GU1 130 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PPP1R9BQ96SB3 815 aa14.22□□□□□ -0.13
ERCC3-209ENST00000494464 PDE11AQ9HCR9 933 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms