RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PARNO95453 639 aaKnown RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 FUCA1P04066 466 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 SOD2P04179 222 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CYP2C9P11712 490 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 STAT2P52630 851 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 OAZ1P54368 228 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 NKX3-2P78367 333 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 RAB30Q15771 203 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 BRDTQ58F21 947 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CT47A1Q5JQC4 288 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 MROH9Q5TGP6 573 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 KRT40Q6A162 431 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 RASGRP2Q7LDG7 609 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CABP7Q86V35 215 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 TEX2Q8IWB9 1127 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 ZC3H7AQ8IWR0 971 aaKnown RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 FBXO16Q8IX29 292 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 GMCL1P1Q8NEA9 526 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 PCDH19Q8TAB3 1148 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 PLEKHO2Q8TD55 490 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CHURC1Q8WUH1 139 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 UHRF1Q96T88 793 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 WNT8AQ9H1J5 351 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 CDIP1Q9H305 208 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 ZNF287Q9HBT7 754 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 IL17RBQ9NRM6 502 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 THEGQ9P2T0 379 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 FBXL7Q9UJT9 491 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 STX8Q9UNK0 236 aa6.05□□□□□ -1.44
PTCD3-219ENST00000494323 TRIP12Q14669 1992 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-219ENST00000494323 MUC3AQ02505 3323 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 ZEB2O60315 1214 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 KPNA6O60684 536 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 MYL3P08590 195 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 MSL3P1P0C860 447 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 JMJD7P0C870 316 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 ATP2A2P16615 1042 aaKnown RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 GNAT2P19087 354 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 PMLP29590 882 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 SLC16A2P36021 539 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 KCNQ1P51787 676 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 PPARAQ07869 468 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 BAATQ14032 418 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 DHCR24Q15392 516 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 BICRALQ6AI39 1079 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 ZCCHC8Q6NZY4 707 aaKnown RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 LHFPL2Q6ZUX7 228 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 UBE2R2Q712K3 238 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 DDX53Q86TM3 631 aaKnown RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 FERMT3Q86UX7 667 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 FAM160B2Q86V87 743 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 AHI1Q8N157 1196 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 BHLHE22Q8NFJ8 381 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 LEO1Q8WVC0 666 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 ORAI3Q9BRQ5 295 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 WDR11Q9BZH6 1224 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 NACAP1Q9BZK3 213 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 NAPBQ9H115 298 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 ALDH8A1Q9H2A2 487 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 MTIF3Q9H2K0 278 aaKnown RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 CHMP4BQ9H444 224 aaKnown RBP6.04□□□□□ -1.44
PTCD3-219ENST00000494323 EPB41L1Q9H4G0 881 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 DCTPP1Q9H773 170 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 CYP39A1Q9NYL5 469 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 MCM8Q9UJA3 840 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 CCPG1Q9ULG6 757 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 TET1Q8NFU7 2136 aa6.04□□□□□ -1.44
PTCD3-219ENST00000494323 GREB1LQ9C091 1923 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 BRWD1Q9NSI6 2320 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 SCN5AQ14524 2016 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 PTPDC1A2A3K4 754 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 EPOPA6NHQ4 379 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 TSPY2A6NKD2 308 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 RANBP6O60518 1105 aaKnown RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 DGKIO75912 1065 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 EFEMP2O95967 443 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 S100BP04271 92 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 CA3P07451 260 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 ZFYP08048 801 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 SLC3A2P08195 630 aaKnown RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 FPR2P25090 351 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 TACR1P25103 407 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 CALML3P27482 149 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 EXOSC10Q01780 885 aaKnown RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 SPIRE1Q08AE8 756 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 KIR3DS1Q14943 382 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 DUSP28Q4G0W2 176 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 CDCA2Q69YH5 1023 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 PRR23BQ6ZRT6 265 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 NETO2Q8NC67 525 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 OTUD7AQ8TE49 926 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 PPP1R16BQ96T49 567 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
PTCD3-219ENST00000494323 FTOQ9C0B1 505 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTCD3-219ENST00000494323 RNF32Q9H0A6 362 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms