RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 BLOC1S4Q9NUP1 217 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 DDX19AQ9NUU7 478 aaKnown RBP7.29□□□□□ -1.24
TRA2B-216ENST00000493864 WHRNQ9P202 907 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 WRAP73Q9P2S5 460 aaPredicted RBP7.29□□□□□ -1.24
TRA2B-216ENST00000493864 FAM184BQ9ULE4 1060 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 PCDHA10Q9Y5I2 948 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 PTCH2Q9Y6C5 1203 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 LRRC37A2A6NM11 1700 aa7.29□□□□□ -1.24
TRA2B-216ENST00000493864 E9PMD0 336 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SLC26A4O43511 780 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SUSD5O60279 629 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 ADAMTS4O75173 837 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 WNT11O96014 354 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SUPT20HL2P0C7V6 817 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 NAT2P11245 290 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 CASP1P29466 404 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SFNP31947 248 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 STAT6P42226 847 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 AFMP43652 599 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 QARSP47897 775 aaKnown RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SERINC3Q13530 473 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 DHX8Q14562 1220 aaKnown RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PPP2R5DQ14738 602 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 GAB4Q2WGN9 574 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 HSDL1Q3SXM5 330 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SV2CQ496J9 727 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 DUSP28Q4G0W2 176 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 CCDC183Q5T5S1 534 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 UTP14CQ5TAP6 766 aaKnown RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 MIS18BP1Q6P0N0 1132 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 FBXO46Q6PJ61 603 aaPredicted RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 METTL7BQ6UX53 244 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 TMPRSS7Q7RTY8 843 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 FIBCD1Q8N539 461 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 ZNF655Q8N720 491 aaPredicted RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 CNNM3Q8NE01 707 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 RDM1Q8NG50 284 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PIGOQ8TEQ8 1089 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 AFG1LQ8WV93 481 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SEPT1Q8WYJ6 367 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 ERCC4Q92889 916 aaPredicted RBP7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PAGE5Q96GU1 130 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 CDK5RAP3Q96JB5 506 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 TIGD1Q96MW7 591 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 SPATA33Q96N06 139 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PCYT2Q99447 389 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 GPR20Q99678 358 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PRR13Q9NZ81 148 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 APEX2Q9UBZ4 518 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 USP25Q9UHP3 1055 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 PTPN22Q9Y2R2 807 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 FHOD1Q9Y613 1164 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 FRMPD3Q5JV73 1810 aa7.28□□□□□ -1.24
TRA2B-216ENST00000493864 IGKV6D-21A0A0A0MT36 114 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 TMEM150BA6NC51 233 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 STBD1O95210 358 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 HMGCRP04035 888 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PLA2G4BP0C869 781 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CYBAP13498 195 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CNGA1P29973 690 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CCND3P30281 292 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 TCF7P36402 384 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 ZNF143P52747 638 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PRMT2P55345 433 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PSMC5P62195 406 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PNOCQ13519 176 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 ARTNQ5T4W7 220 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 HAUS3Q68CZ6 603 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 TRMT1LQ7Z2T5 733 aaKnown RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 WFDC3Q8IUB2 231 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CCDC60Q8IWA6 550 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 SMAP1Q8IYB5 467 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CEP57L1Q8IYX8 460 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 SH3TC2Q8TF17 1288 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 RAD54LQ92698 747 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PYM1Q9BRP8 204 aaKnown RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 LXNQ9BS40 222 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 NT5C3AQ9H0P0 336 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 AP5M1Q9H0R1 490 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 NUP62CLQ9H1M0 184 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 OSBPL2Q9H1P3 480 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 BLZF1Q9H2G9 400 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 TNMDQ9H2S6 317 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 ZSWIM4Q9H7M6 989 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 CARS2Q9HA77 564 aaKnown RBP7.27□□□□□ -1.25
TRA2B-216ENST00000493864 NRBP1Q9UHY1 535 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 PCDHA11Q9Y5I1 949 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 KDM3AQ9Y4C1 1321 aa7.27□□□□□ -1.25
TRA2B-216ENST00000493864 DNAH12Q6ZR08 3092 aa7.26□□□□□ -1.25
TRA2B-216ENST00000493864 NPHP3-ACAD11A0A0J9YXS1 232 aa7.26□□□□□ -1.25
TRA2B-216ENST00000493864 SSU72P8A0A1W2PR75 194 aa7.26□□□□□ -1.25
TRA2B-216ENST00000493864 MYMKA6NI61 221 aa7.26□□□□□ -1.25
TRA2B-216ENST00000493864 H0Y8X5 98 aa7.26□□□□□ -1.25
TRA2B-216ENST00000493864 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms