RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RAD9AQ99638 391 aa20.75■□□□□ 0.91
USP39-218ENST00000493829 GPR88Q9GZN0 384 aa20.75■□□□□ 0.91
USP39-218ENST00000493829 IMPACTQ9P2X3 320 aa20.75■□□□□ 0.91
USP39-218ENST00000493829 L1RE1Q9UN81 338 aa20.75■□□□□ 0.91
USP39-218ENST00000493829 TIMM13Q9Y5L4 95 aaPredicted RBP20.75■□□□□ 0.91
USP39-218ENST00000493829 ALDH7A1P49419 539 aaKnown RBP20.74■□□□□ 0.91
USP39-218ENST00000493829 RGS19P49795 217 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 JAM2P57087 298 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 ZBED6P86452 979 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 E4F1Q66K89 784 aaPredicted RBP20.74■□□□□ 0.91
USP39-218ENST00000493829 COLGALT1Q8NBJ5 622 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 ZNF397Q8NF99 534 aaPredicted RBP20.74■□□□□ 0.91
USP39-218ENST00000493829 ZNF558Q96NG5 402 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 MRPL45Q9BRJ2 306 aaKnown RBP20.74■□□□□ 0.91
USP39-218ENST00000493829 COLEC11Q9BWP8 271 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 STK33Q9BYT3 514 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 BCO2Q9BYV7 579 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 CISHQ9NSE2 258 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 HMGXB4Q9UGU5 601 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 FBXL5Q9UKA1 691 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 ADAM28Q9UKQ2 775 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 PCDHB4Q9Y5E5 795 aa20.74■□□□□ 0.91
USP39-218ENST00000493829 LAMA2P24043 3122 aaKnown RBP20.74■□□□□ 0.91
USP39-218ENST00000493829 HUS1O60921 280 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 GFPT2O94808 682 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 SOWAHAQ2M3V2 549 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 ZNF394Q53GI3 561 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 KCNT2Q6UVM3 1135 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 TC2NQ8N9U0 490 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 APPL2Q8NEU8 664 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 IQCDQ96DY2 449 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 GDAP2Q9NXN4 497 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 FOXN3O00409 490 aaPredicted RBP20.73■□□□□ 0.91
USP39-218ENST00000493829 HCRTO43612 131 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 CALCAP01258 141 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 LAG3P18627 525 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 AARSP49588 968 aaKnown RBP eCLIP20.73■□□□□ 0.91
USP39-218ENST00000493829 WSCD1Q658N2 575 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 TMEM270Q6UE05 265 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 ENOSF1Q7L5Y1 443 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 CNGA4Q8IV77 575 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 ADGRF2Q8IZF7 708 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 PDCL2Q8N4E4 241 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 SHC3Q92529 594 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 B3GALT6Q96L58 329 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 ABHD10Q9NUJ1 306 aa20.73■□□□□ 0.91
USP39-218ENST00000493829 TMEM189-UBE2V1I3L0A0 370 aa20.72■□□□□ 0.91
USP39-218ENST00000493829 ODC1P11926 461 aa20.72■□□□□ 0.91
USP39-218ENST00000493829 ACO1P21399 889 aaKnown RBP20.72■□□□□ 0.91
USP39-218ENST00000493829 STAT1P42224 750 aa20.72■□□□□ 0.91
USP39-218ENST00000493829 SFMBT2Q5VUG0 894 aa20.72■□□□□ 0.91
USP39-218ENST00000493829 EDEM3Q9BZQ6 932 aa20.72■□□□□ 0.91
USP39-218ENST00000493829 ARHGEF15O94989 841 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 SOX5P35711 763 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 ASIC2Q16515 512 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 FUT10Q6P4F1 479 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 SPRED2Q7Z698 418 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 UBR7Q8N806 425 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 RBBP8NLQ8NC74 664 aaPredicted RBP20.71■□□□□ 0.91
USP39-218ENST00000493829 OR6B3Q8NGW1 331 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 SP7Q8TDD2 431 aaPredicted RBP20.71■□□□□ 0.91
USP39-218ENST00000493829 KBTBD7Q8WVZ9 684 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 SUSD3Q96L08 255 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 FAM81BQ96LP2 452 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 PPP1R9BQ96SB3 815 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 GPR62Q9BZJ7 368 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 ACP6Q9NPH0 428 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 MTUS1Q9ULD2 1270 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 DAAM1Q9Y4D1 1078 aa20.71■□□□□ 0.91
USP39-218ENST00000493829 SF3B1O75533 1304 aaKnown RBP eCLIP20.71■□□□□ 0.913e-9■■■■■ 206.8
USP39-218ENST00000493829 CYP26A1O43174 497 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 CA3P07451 260 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 TKTP29401 623 aaKnown RBP20.7■□□□□ 0.91
USP39-218ENST00000493829 PBX2P40425 430 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 NDST1P52848 882 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 CHRDL2Q6WN34 429 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 OSTM1Q86WC4 334 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 CEP57Q86XR8 500 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 SLC39A11Q8N1S5 342 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 TOP6BLQ8N6T0 577 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 TWNKQ96RR1 684 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 SNX25Q9H3E2 840 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 CYP3A43Q9HB55 503 aa20.7■□□□□ 0.91
USP39-218ENST00000493829 NLRC5Q86WI3 1866 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 LINC00271P0C7V0 271 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 CTNNB1P35222 781 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 CDR1P51861 262 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 GSDMDP57764 484 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 YWHAEP62258 255 aaKnown RBP20.7■□□□□ 0.9
USP39-218ENST00000493829 FAM171A1Q5VUB5 890 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 OR8K1Q8NGG5 319 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 IGSF21Q96ID5 467 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 DNAJC7Q99615 494 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 PCDHB8Q9UN66 801 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 NME7Q9Y5B8 376 aa20.7■□□□□ 0.9
USP39-218ENST00000493829 RANBP2P49792 3224 aaKnown RBP20.69■□□□□ 0.9
USP39-218ENST00000493829 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
USP39-218ENST00000493829 M0QZQ0 153 aa20.69■□□□□ 0.9
USP39-218ENST00000493829 TRAPPC3O43617 180 aa20.69■□□□□ 0.9
USP39-218ENST00000493829 CILPO75339 1184 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms