RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 BCL2L14Q9BZR8 327 aa8.21□□□□□ -1.1
BRCA1-221ENST00000493795 DAPK2Q9UIK4 370 aa8.21□□□□□ -1.1
BRCA1-221ENST00000493795 KIAA0232Q92628 1395 aa8.21□□□□□ -1.1
BRCA1-221ENST00000493795 LMTK3Q96Q04 1460 aa8.21□□□□□ -1.1
BRCA1-221ENST00000493795 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.1
BRCA1-221ENST00000493795 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PSTPIP1O43586 416 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SOAT2O75908 522 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 FOSL2P15408 326 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ITIH2P19823 946 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 COPAP53621 1224 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 COASYQ13057 564 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CYP51A1Q16850 503 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 KNOP1Q1ED39 458 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 FAM83BQ5T0W9 1011 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 AGBL2Q5U5Z8 902 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SDE2Q6IQ49 451 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 TRIM48Q8IWZ4 208 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SEPT1Q8WYJ6 367 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PHACTR1Q9C0D0 580 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MUC3BQ9H195 1237 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 FAM153AQ9UHL3 310 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZHX2Q9Y6X8 837 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZMYM3Q14202 1370 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 KPNA4O00629 521 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF862O60290 1169 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ECDO95905 644 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SFNP31947 248 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 NT5C2P49902 561 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 DYNLL1P63167 89 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CACNB2Q08289 660 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MACC1Q6ZN28 852 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PEG10Q86TG7 708 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 EPHX4Q8IUS5 362 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 OSBPL8Q9BZF1 889 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 GRID1Q9ULK0 1009 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PCDHA6Q9UN73 950 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 KDM5BQ9UGL1 1544 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PVALEFA0A1B0GWK0 134 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 RTN2O75298 545 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ATP1A3P13637 1013 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CCDC130P13994 396 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 IL13P35225 146 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CTCFP49711 727 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CHRNB3Q05901 458 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MIGA2Q7L4E1 593 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 RNPC3Q96LT9 517 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SLITRK2Q9H156 845 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 POLR3FQ9H1D9 316 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 RWDD3Q9Y3V2 267 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 EIF3HO15372 352 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PDE8BO95263 885 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 NFICP08651 508 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 GTF2E2P29084 291 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CYP2C19P33261 490 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 GUCY1A2P33402 732 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 NPEPPSP55786 919 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 STX4Q12846 297 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 STILQ15468 1287 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 TAB1Q15750 504 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 LONRF1Q17RB8 773 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 FUT11Q495W5 492 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF746Q6NUN9 644 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 HS6ST3Q8IZP7 471 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 RDM1Q8NG50 284 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 PPP2R3CQ969Q6 453 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ZNF496Q96IT1 587 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 AGAP3Q96P47 875 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CCT8L2Q96SF2 557 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 STN1Q9H668 368 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MANSC1Q9H8J5 431 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 INTS13Q9NVM9 706 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 WWOXQ9NZC7 414 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 MYO3BQ8WXR4 1341 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 ARHGEF10O15013 1369 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 SMAPO00193 183 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 EEF2KO00418 725 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 POLBP06746 335 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 WEE2P0C1S8 567 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 HPGDP15428 266 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 NUDT2P50583 147 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CYP4A22Q5TCH4 519 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 TYW3Q6IPR3 259 aaKnown RBP8.2□□□□□ -1.1
BRCA1-221ENST00000493795 CDC73Q6P1J9 531 aa8.2□□□□□ -1.1
BRCA1-221ENST00000493795 OTOAQ7RTW8 1153 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms