RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 UBE4BO95155 1302 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 PRR23AA6NEV1 266 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 C2CD4DB7Z1M9 353 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 PSMA7O14818 248 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 CXCL14O95715 111 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 MYBP10242 640 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 CA8P35219 290 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 NBL1P41271 181 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 NCKAP1LP55160 1127 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 FOXK2Q01167 660 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 POU4F2Q12837 409 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 MTMR3Q13615 1198 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 LLGL2Q6P1M3 1020 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
UPF3A-210ENST00000493727 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 TMEM105Q8N8V8 129 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 FGFBP2Q9BYJ0 223 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 POMKQ9H5K3 350 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 NXF1Q9UBU9 619 aaKnown RBP13.22□□□□□ -0.29
UPF3A-210ENST00000493727 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 HCFC2Q9Y5Z7 792 aa13.22□□□□□ -0.29
UPF3A-210ENST00000493727 MYH11P35749 1972 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 NT5C1B-RDH14C9J2C7 533 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.29
UPF3A-210ENST00000493727 CLASP2O75122 1294 aaKnown RBP13.21□□□□□ -0.29
UPF3A-210ENST00000493727 OFD1O75665 1012 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 ERLIN2O94905 339 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
UPF3A-210ENST00000493727 CTSAP10619 480 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 RHOQP17081 205 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 BMP6P22004 513 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 AXLP30530 894 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 PRCPP42785 496 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 MTHFRP42898 656 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 CASP5P51878 434 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.29
UPF3A-210ENST00000493727 STRN3Q13033 797 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 ZNF720Q7Z2F6 126 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 HAUS6Q7Z4H7 955 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 UBALD2Q8IYN6 164 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 GLIS3Q8NEA6 775 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 LPPQ93052 612 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
UPF3A-210ENST00000493727 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 SMOC2Q9H3U7 446 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 EXOC7Q9UPT5 735 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
UPF3A-210ENST00000493727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.2□□□□□ -0.3
UPF3A-210ENST00000493727 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 GALTP07902 379 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 EFNA5P52803 228 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 PAK1Q13153 545 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
UPF3A-210ENST00000493727 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
UPF3A-210ENST00000493727 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
UPF3A-210ENST00000493727 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
UPF3A-210ENST00000493727 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 SCFD1Q8WVM8 642 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 NELFBQ8WX92 580 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 BICD1Q96G01 975 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 TSG101Q99816 390 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 TMEM175Q9BSA9 504 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 TMEM206Q9H813 350 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
UPF3A-210ENST00000493727 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 FRYLO94915 3013 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.19□□□□□ -0.3
UPF3A-210ENST00000493727 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 A6NJY4 79 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 BECN2A8MW95 431 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 K7ERI5 159 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 TERTO14746 1132 aaKnown RBP13.19□□□□□ -0.3
UPF3A-210ENST00000493727 CAVIN2O95810 425 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 ALDH2P05091 517 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 PRKCBP05771 671 aa13.19□□□□□ -0.3
UPF3A-210ENST00000493727 EPHA4P54764 986 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms