RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 NOC3LQ8WTT2 800 aaKnown RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 FAM122AQ96E09 287 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 SAAL1Q96ER3 474 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 FBXL5Q9UKA1 691 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 PCDHA7Q9UN72 937 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 STYXL1Q9Y6J8 313 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 MUC6Q6W4X9 2439 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 GOLGA8IPA6NC78 632 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 GOLGA8JA6NMD2 632 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 H7C4K7 107 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SYN3O14994 580 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 POLR2DO15514 142 aaKnown RBP11.56□□□□□ -0.56
COL6A3-214ENST00000493608 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
COL6A3-214ENST00000493608 TBC1D4O60343 1298 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 PAPLNO95428 1278 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SEC24AO95486 1093 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ADRB2P07550 413 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 CYP3A5P20815 502 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 CASP1P29466 404 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ELF1P32519 619 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ABCD1P33897 745 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ME1P48163 572 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 CDR1P51861 262 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 TMEM132DQ14C87 1099 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SLC8B1Q6J4K2 584 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
COL6A3-214ENST00000493608 CCDC65Q8IXS2 484 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 UBALD2Q8IYN6 164 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 SYCP3Q8IZU3 236 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 FBXL6Q8N531 539 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 BEST2Q8NFU1 509 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ZNF461Q8TAF7 563 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 ITFG1Q8TB96 612 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 HVCN1Q96D96 273 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 FAM213AQ9BRX8 229 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 RHOBTB2Q9BYZ6 727 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 CYP4F11Q9HBI6 524 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
COL6A3-214ENST00000493608 DNMT3BQ9UBC3 853 aaKnown RBP11.56□□□□□ -0.56
COL6A3-214ENST00000493608 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 M0QZQ0 153 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 PRRG1O14668 218 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 SPTLC1O15269 473 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
COL6A3-214ENST00000493608 XYLBO75191 536 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 ABLIM3O94929 683 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL6A3-214ENST00000493608 OR4Q2P0C623 313 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 LAMP2P13473 410 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 VCPP55072 806 aaKnown RBP11.55□□□□□ -0.56
COL6A3-214ENST00000493608 WNT7BP56706 349 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 LILRA4P59901 499 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 ASIC1P78348 528 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 TDGQ13569 410 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 POSTNQ15063 836 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 UVSSAQ2YD98 709 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 C9orf57Q5W0N0 161 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 ZNF280DQ6N043 979 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 CD302Q8IX05 232 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 APPL2Q8NEU8 664 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 FAM84AQ96KN4 292 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 SENP8Q96LD8 212 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 RPP25Q9BUL9 199 aaKnown RBP11.55□□□□□ -0.56
COL6A3-214ENST00000493608 BLZF1Q9H2G9 400 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 TNMDQ9H2S6 317 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 OLFML3Q9NRN5 406 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 KBTBD4Q9NVX7 518 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL6A3-214ENST00000493608 EPS15L1Q9UBC2 864 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 EXOC7Q9UPT5 735 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 ZDHHC9Q9Y397 364 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
COL6A3-214ENST00000493608 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
COL6A3-214ENST00000493608 CPB1P15086 417 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 ATF2P15336 505 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 HOXA9P31269 272 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 PLA2G5P39877 138 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 AFMP43652 599 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 YWHAHQ04917 246 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-214ENST00000493608 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
COL6A3-214ENST00000493608 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 USP37Q86T82 979 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 GRAMD1CQ8IYS0 662 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 KCNG4Q8TDN1 519 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 FGF13Q92913 245 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 PGLYRP2Q96PD5 576 aa11.54□□□□□ -0.56
COL6A3-214ENST00000493608 TMEM209Q96SK2 561 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms