RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 GLYCTKQ8IVS8 523 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 POF1BQ8WVV4 589 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 RIN2Q8WYP3 895 aaPredicted RBP16.89■□□□□ 0.29
HPS4-216ENST00000493455 TAF4BQ92750 862 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 ARID3AQ99856 593 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 HERC2P3Q9BVR0 1158 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 ZNF576Q9H609 170 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 L1RE1Q9UN81 338 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 MYO9BQ13459 2157 aa16.89■□□□□ 0.29
HPS4-216ENST00000493455 GTPBP10A4D1E9 387 aaKnown RBP16.88■□□□□ 0.29
HPS4-216ENST00000493455 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 PMM2O15305 246 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 AP5Z1O43299 807 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 SOD2P04179 222 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 URODP06132 367 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 RB1P06400 928 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 WEE2P0C1S8 567 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 GLUD2P49448 558 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 CDR1P51861 262 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 CDH8P55286 799 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 PLCB3Q01970 1234 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 ARHGAP44Q17R89 818 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 RTP2Q5QGT7 225 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 PLPP4Q5VZY2 271 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
HPS4-216ENST00000493455 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 SPPL3Q8TCT6 385 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 KAT5Q92993 513 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 TTPALQ9BTX7 342 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 UBE2TQ9NPD8 197 aaPredicted RBP16.88■□□□□ 0.29
HPS4-216ENST00000493455 ATG2AQ2TAZ0 1938 aa16.88■□□□□ 0.29
HPS4-216ENST00000493455 H3BNC9 293 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 M0QZQ0 153 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 HCRTO43612 131 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 STAU1O95793 577 aaKnown RBP16.87■□□□□ 0.29
HPS4-216ENST00000493455 DNAJB1P25685 340 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 ASPAP45381 313 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
HPS4-216ENST00000493455 ARPP19P56211 112 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 RAPGEF1Q13905 1077 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 NR1I3Q14994 352 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 UVSSAQ2YD98 709 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 OVOS1Q6IE37 1185 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
HPS4-216ENST00000493455 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 TOP6BLQ8N6T0 577 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 TCF25Q9BQ70 676 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 MRPL45Q9BRJ2 306 aaKnown RBP16.87■□□□□ 0.29
HPS4-216ENST00000493455 SDCBP2Q9H190 292 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 SNX25Q9H3E2 840 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 PRDM12Q9H4Q4 367 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 TLR9Q9NR96 1032 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 GDAP2Q9NXN4 497 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 PCDHGC5Q9Y5F6 944 aa16.87■□□□□ 0.29
HPS4-216ENST00000493455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 SYN3O14994 580 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 LPXNO60711 386 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 RPL17P18621 184 aaKnown RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 FGFR3P22607 806 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 USP8P40818 1118 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 ERVFC1P60507 584 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 YWHAHQ04917 246 aaPredicted RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 ORC1Q13415 861 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 CUL2Q13617 745 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 PSMD5Q16401 504 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 CTXN3Q4LDR2 81 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 PHLDB3Q6NSJ2 640 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 VRTNQ9H8Y1 702 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 NLRC4Q9NPP4 1024 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 APEX2Q9UBZ4 518 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 DNAJC12Q9UKB3 198 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 AJAP1Q9UKB5 411 aaPredicted RBP16.86■□□□□ 0.29
HPS4-216ENST00000493455 DSEQ9UL01 958 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 SIK3Q9Y2K2 1263 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 FHOD1Q9Y613 1164 aa16.86■□□□□ 0.29
HPS4-216ENST00000493455 LAMA2P24043 3122 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 CXCL14O95715 111 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 PDGFRBP09619 1106 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 PAX3P23760 479 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 TBXAS1P24557 533 aaPredicted RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 IRS1P35568 1242 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 MFAP3P55082 362 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms