RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MYOCQ99972 504 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 HEPHQ9BQS7 1158 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 INO80BQ9C086 356 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-218ENST00000493430 VTA1Q9NP79 307 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 SLC17A6Q9P2U8 582 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 ACTL7AQ9Y615 435 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 NCOA1Q15788 1441 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 ERVK-7P63135 1459 aa4.36□□□□□ -1.71
PTCD3-218ENST00000493430 TCOF1Q13428 1488 aaKnown RBP4.36□□□□□ -1.71
PTCD3-218ENST00000493430 TMEM131LA2VDJ0 1609 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 GPR32O75388 356 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 MATN4O95460 622 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 PCSK1P29120 753 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 MGAT2Q10469 447 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 SEPT2Q15019 361 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 CT47A1Q5JQC4 288 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-218ENST00000493430 SP5Q6BEB4 398 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-218ENST00000493430 LNX2Q8N448 690 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 CCHCR1Q8TD31 782 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 NUP133Q8WUM0 1156 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 CHAC2Q8WUX2 184 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 AHCYL2Q96HN2 611 aaKnown RBP4.35□□□□□ -1.71
PTCD3-218ENST00000493430 NAF1Q96HR8 494 aaKnown RBP4.35□□□□□ -1.71
PTCD3-218ENST00000493430 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 WDR26Q9H7D7 661 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 MANSC1Q9H8J5 431 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 C14orf119Q9NWQ9 140 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 KCTD5Q9NXV2 234 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 FRMD4BQ9Y2L6 1034 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 PCDHGA2Q9Y5H1 932 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 KIAA1107Q9UPP5 1409 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 PZPP20742 1482 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 MAP3K1Q13233 1512 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 DUOX2Q9NRD8 1548 aa4.35□□□□□ -1.71
PTCD3-218ENST00000493430 FAM171A2A8MVW0 826 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 MGST3O14880 152 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 KIF3BO15066 747 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 PEX1O43933 1283 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 PROP1O75360 226 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 CPEP16870 476 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 GPR3P46089 330 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 SLC6A9P48067 706 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 CREMQ03060 361 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 STAT4Q14765 748 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 RUVBL1Q9Y265 456 aaKnown RBP4.34□□□□□ -1.71
PTCD3-218ENST00000493430 TBX22Q9Y458 520 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 ZNF335Q9H4Z2 1342 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-218ENST00000493430 A2ML1A8K2U0 1454 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 ADGRB3O60242 1522 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 KDM5AP29375 1690 aaKnown RBP4.34□□□□□ -1.71
PTCD3-218ENST00000493430 ROBO1Q9Y6N7 1651 aa4.34□□□□□ -1.71
PTCD3-218ENST00000493430 PHLPP1O60346 1717 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 SHANK2Q9UPX8 1470 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 MIA2Q96PC5 1412 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 TRGV11A0A075B6L2 103 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 TCRBV7S2A1N4TA0A589 114 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 LRRC3CA6NJW4 275 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 RBMXL2O75526 392 aaKnown RBP4.33□□□□□ -1.72
PTCD3-218ENST00000493430 C1QL1O75973 258 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 AMY1AP04745 511 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 DDCP20711 480 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 MTNR1BP49286 362 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 NOMO3P69849 1222 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 TMPRSS15P98073 1019 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 MTM1Q13496 603 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 GEN1Q17RS7 908 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 NOMO2Q5JPE7 1267 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 AKNAD1Q5T1N1 836 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 AFAP1L2Q8N4X5 818 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 NLGN4YQ8NFZ3 816 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-218ENST00000493430 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 KLK15Q9H2R5 256 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 HSFX1Q9UBD0 423 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 DNM3Q9UQ16 869 aa4.33□□□□□ -1.72
PTCD3-218ENST00000493430 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 MED1Q15648 1581 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 NPATQ14207 1427 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 KIF15Q9NS87 1388 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 MYBBP1AQ9BQG0 1328 aaKnown RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 CDHR4A6H8M9 788 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 KIAA0391O15091 583 aaKnown RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 ORC4O43929 436 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 OSMP13725 252 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 FOLR3P41439 243 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 DACT2Q5SW24 774 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 SRRM1Q8IYB3 904 aaKnown RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 C7orf25Q9BPX7 421 aa4.32□□□□□ -1.72
PTCD3-218ENST00000493430 CCM2LQ9NUG4 571 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-218ENST00000493430 RTEL1-TNFRSF6BF6WH68 1400 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 CNTLNQ9NXG0 1405 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 DHX29Q7Z478 1369 aaKnown RBP4.31□□□□□ -1.72
PTCD3-218ENST00000493430 TNRQ92752 1358 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 CCDC151A5D8V7 595 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 YY2O15391 372 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms