RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SGSM1Q2NKQ1 1148 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 KLHL40Q2TBA0 621 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 PUS10Q3MIT2 529 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 WDR72Q3MJ13 1102 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 ZCWPW2Q504Y3 356 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 ZNF667Q5HYK9 610 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 RTP2Q5QGT7 225 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 KIAA0319Q5VV43 1072 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 KRT39Q6A163 491 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 FOXR2Q6PJQ5 311 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 PRSS55Q6UWB4 352 aaPredicted RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 CCDC149Q6ZUS6 474 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 FRMD5Q7Z6J6 570 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 PALB2Q86YC2 1186 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 DCP1BQ8IZD4 617 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 TMEM86AQ8N2M4 240 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 ELMOD1Q8N336 334 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 EEF2KMTQ96G04 330 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 KLHL5Q96PQ7 755 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 SNX25Q9H3E2 840 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 TIMM13Q9Y5L4 95 aaPredicted RBP8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 CDY1Q9Y6F8 540 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 BRWD1Q9NSI6 2320 aa8.74□□□□□ -1.01
TM4SF1-204ENST00000493348 PRRG1O14668 218 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 PPEF2O14830 753 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 XYLBO75191 536 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 TRIM49P0CI25 452 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 TRIM49CP0CI26 452 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 HOXB8P17481 243 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 RPL17P18621 184 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 PCSK1P29120 753 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 GCLMP48507 274 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 MRPS5P82675 430 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 ADAM15Q13444 863 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 DPH6Q7L8W6 267 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 RNF168Q8IYW5 571 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 ADGRF2Q8IZF7 708 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 TOP6BLQ8N6T0 577 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 LNX1Q8TBB1 728 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 TAF4BQ92750 862 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 VN1R3Q9BXE9 311 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 PLEKHA4Q9H4M7 779 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 PIDD1Q9HB75 910 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 RXFP1Q9HBX9 757 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 MAN1C1Q9NR34 630 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 MTRRQ9UBK8 725 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 CD207Q9UJ71 328 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 BACE2Q9Y5Z0 518 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 HCFC2Q9Y5Z7 792 aa8.73□□□□□ -1.01
TM4SF1-204ENST00000493348 PLXNA3P51805 1871 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SMTNL1A8MU46 457 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 BECN2A8MW95 431 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 H3BQ06 376 aaPredicted RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 C1RP00736 705 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 HLA-DRAP01903 254 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 LRG1P02750 347 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 AFPP02771 609 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 BMP6P22004 513 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 AARSP49588 968 aaKnown RBP eCLIP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 CLCN4P51793 760 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 WNT7BP56706 349 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 MYL6P60660 151 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 YWHAEP62258 255 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 DLG4P78352 724 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 ITIH3Q06033 890 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SMARCB1Q12824 385 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 PLD1Q13393 1074 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 MAPRE1Q15691 268 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 CLUL1Q15846 466 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 TAF12Q16514 161 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 DPCR1Q3MIW9 517 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 ZACNQ401N2 412 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 PPM1LQ5SGD2 360 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 TPGS2Q68CL5 300 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 TTI2Q6NXR4 508 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 ANKRD54Q6NXT1 300 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SCARA5Q6ZMJ2 495 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SV2AQ7L0J3 742 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 KREMEN2Q8NCW0 462 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 FBXL13Q8NEE6 735 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 OR6B3Q8NGW1 331 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SPATA18Q8TC71 538 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 HDAC7Q8WUI4 952 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 CNOT6LQ96LI5 555 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 RIPOR3Q96MK2 946 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 THAP9Q9H5L6 903 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 SFXN1Q9H9B4 322 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 GDAP2Q9NXN4 497 aa8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 DDX43Q9NXZ2 648 aaKnown RBP8.72□□□□□ -1.01
TM4SF1-204ENST00000493348 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms