RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 RYBPQ8N488 228 aaPredicted RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 C4orf32Q8N8J7 132 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 TTC13Q8NBP0 860 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 UBE2OQ9C0C9 1292 aaKnown RBP6.66□□□□□ -1.34
NF1-215ENST00000493220 ZNF518BQ9C0D4 1074 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 C2CD2Q9Y426 696 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 LRRC37AA6NMS7 1700 aa6.66□□□□□ -1.34
NF1-215ENST00000493220 KIF3CO14782 793 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 CYP26A1O43174 497 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 SMARCB1Q12824 385 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TFDP2Q14188 446 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 RWDD4Q6NW29 188 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 ANKS3Q6ZW76 656 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 GSDMBQ8TAX9 411 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 MRPS31Q92665 395 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 C18orf8Q96DM3 657 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 CBWD1Q9BRT8 395 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 INTS13Q9NVM9 706 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 PCDHB8Q9UN66 801 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TTLL3Q9Y4R7 772 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 C2CD2LO14523 706 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 PEX10O60683 326 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 HEXIM1O94992 359 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 IVLP07476 585 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 CYP3A5P20815 502 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 AKAP5P24588 427 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 BCAT1P54687 386 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 AMPD2Q01433 879 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 PPM1LQ5SGD2 360 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 OVOS1Q6IE37 1185 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TMEM161BQ8NDZ6 487 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 ABI2Q9NYB9 513 aaPredicted RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 NRXN2Q9P2S2 1712 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 RECQL4O94761 1208 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TJP3O95049 919 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 SNAI1O95863 264 aaPredicted RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 ATP1A3P13637 1013 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 UCHL3P15374 230 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TUFMP49411 452 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 HARS2P49590 506 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 RWDD2BP57060 319 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 ENPEPQ07075 957 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 SFSWAPQ12872 951 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 MFSD4BQ5TF39 518 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 NAA35Q5VZE5 725 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 CENPPQ6IPU0 288 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 EFHBQ8N7U6 833 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 TTC1Q99614 292 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 NUP85Q9BW27 656 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 OLA1Q9NTK5 396 aaKnown RBP6.65□□□□□ -1.34
NF1-215ENST00000493220 FAM105AQ9NUU6 356 aa6.65□□□□□ -1.34
NF1-215ENST00000493220 ABHD14A-ACY1A0A1B0GW23 586 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 KRIT1O00522 736 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 TREHO43280 583 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 CYBAP13498 195 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 GTF2A1P52655 376 aaPredicted RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 BMT2Q1RMZ1 405 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 USP41Q3LFD5 358 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 KLHDC7AQ5VTJ3 777 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 MICALCLQ6ZW33 695 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 TRIB2Q92519 343 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 HSPH1Q92598 858 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 EPAS1Q99814 870 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 C11orf70Q9BRQ4 267 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 FBXO44Q9H4M3 255 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.65□□□□□ -1.35
NF1-215ENST00000493220 THG1LQ9NWX6 298 aaKnown RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 LAMB1P07942 1786 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 LSM8O95777 96 aaKnown RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 COL6A1P12109 1028 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 MLH1P40692 756 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 POU5F1Q01860 360 aaKnown RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 NFIL3Q16649 462 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 CDO1Q16878 200 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 LGSNQ5TDP6 509 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 FAM171A1Q5VUB5 890 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 CDR2LQ86X02 465 aaPredicted RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 HERC6Q8IVU3 1022 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 ATP6V0D2Q8N8Y2 350 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 HELQQ8TDG4 1101 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 ELOVL4Q9GZR5 314 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 TMEM117Q9H0C3 514 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 SEMA6BQ9H3T3 888 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 ZWILCHQ9H900 591 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 TRPM5Q9NZQ8 1165 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 UVRAGQ9P2Y5 699 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 ANAPC7Q9UJX3 599 aa6.65□□□□□ -1.35
NF1-215ENST00000493220 BARX2Q9UMQ3 279 aaPredicted RBP6.65□□□□□ -1.35
NF1-215ENST00000493220 PASKQ96RG2 1323 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 TMEM150BA6NC51 233 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 POLR3GO15318 223 aaPredicted RBP6.64□□□□□ -1.35
NF1-215ENST00000493220 EDNRBP24530 442 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 ITIH3Q06033 890 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 KAZNQ674X7 775 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 TSC1Q92574 1164 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 TRAIPQ9BWF2 469 aa6.64□□□□□ -1.35
NF1-215ENST00000493220 FAM124BQ9H5Z6 455 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms