RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FBXL5Q9UKA1 691 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 DSEQ9UL01 958 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 CTNND2Q9UQB3 1225 aa13.77□□□□□ -0.21
CLIP2-209ENST00000493166 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 OAZ2O95190 189 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 CYP11A1P05108 521 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 BMP1P13497 986 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 VAMP7P51809 220 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
CLIP2-209ENST00000493166 ARPP19P56211 112 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 DLG4P78352 724 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 CLDN10P78369 228 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 FKBP3Q00688 224 aaKnown RBP13.76□□□□□ -0.21
CLIP2-209ENST00000493166 BIRC3Q13489 604 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 TRPC3Q13507 836 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 RAB33AQ14088 237 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 RARS2Q5T160 578 aaKnown RBP13.76□□□□□ -0.21
CLIP2-209ENST00000493166 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-209ENST00000493166 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 HDAC7Q8WUI4 952 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 HPDLQ96IR7 371 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
CLIP2-209ENST00000493166 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
CLIP2-209ENST00000493166 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 OR6C75A6NL08 312 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 HUS1O60921 280 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 CLSTN1O94985 981 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 MBD3O95983 291 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 CPB1P15086 417 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 IL9P15248 144 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 ROR1Q01973 937 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 ITIH3Q06033 890 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 PAK1Q13153 545 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
CLIP2-209ENST00000493166 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
CLIP2-209ENST00000493166 S1PR5Q9H228 398 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 ADAM7Q9H2U9 754 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 GDAP2Q9NXN4 497 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 FBXW11Q9UKB1 542 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-209ENST00000493166 SNX9Q9Y5X1 595 aa13.75□□□□□ -0.21
CLIP2-209ENST00000493166 MYH10P35580 1976 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 PTPRDP23468 1912 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 WDR27A2RRH5 827 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 IKBKBO14920 756 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 SLC16A3O15427 465 aaKnown RBP13.74□□□□□ -0.21
CLIP2-209ENST00000493166 CST3P01034 146 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-209ENST00000493166 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 ENPEPQ07075 957 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 SMAD2Q15796 467 aaKnown RBP13.74□□□□□ -0.21
CLIP2-209ENST00000493166 WSCD1Q658N2 575 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 ZNF461Q8TAF7 563 aa13.74□□□□□ -0.21
CLIP2-209ENST00000493166 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-209ENST00000493166 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 RFPL2O75678 378 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 C4BPAP04003 597 aaKnown RBP13.73□□□□□ -0.21
CLIP2-209ENST00000493166 C8AP07357 584 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 ELF1P32519 619 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 MTHFRP42898 656 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 STX17P56962 302 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 MYL6P60660 151 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 TNNC1P63316 161 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 NCOA4Q13772 614 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 ZACNQ401N2 412 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-209ENST00000493166 PPM1LQ5SGD2 360 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 TPGS2Q68CL5 300 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 CCDC149Q6ZUS6 474 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 ADGRF2Q8IZF7 708 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 TOP6BLQ8N6T0 577 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 MLKLQ8NB16 471 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 CMASQ8NFW8 434 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-209ENST00000493166 SLC7A14Q8TBB6 771 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 SUSD6Q92537 303 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 CEP63Q96MT8 703 aa13.73□□□□□ -0.21
CLIP2-209ENST00000493166 DUSP9Q99956 384 aaKnown RBP13.73□□□□□ -0.21
CLIP2-209ENST00000493166 COL25A1Q9BXS0 654 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms