RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CLP1Q92989 425 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 DDX27Q96GQ7 796 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 ZBED2Q9BTP6 218 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 LSM14BQ9BX40 385 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 VN1R3Q9BXE9 311 aa10.06□□□□□ -0.8
CSTF1-206ENST00000493039 MTIF3Q9H2K0 278 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 YBX2Q9Y2T7 364 aaKnown RBP10.06□□□□□ -0.8
CSTF1-206ENST00000493039 KPNA7A9QM74 516 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 UCHL3P15374 230 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 ATICP31939 592 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 ASPAP45381 313 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 TBX2Q13207 712 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 UROC1Q96N76 676 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 MYCBPQ99417 103 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 PAIP2Q9BPZ3 127 aaKnown RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 GPR62Q9BZJ7 368 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 GPR88Q9GZN0 384 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 SDCBP2Q9H190 292 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 KDM4CQ9H3R0 1056 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 GDAP2Q9NXN4 497 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 NME7Q9Y5B8 376 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 TMEM189-UBE2V1I3L0A0 370 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 GYPCP04921 128 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 PAX3P23760 479 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 CDH8P55286 799 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 CETN1Q12798 172 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 SOWAHAQ2M3V2 549 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 ZNF699Q32M78 642 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 PUS10Q3MIT2 529 aaKnown RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 SPECC1LQ69YQ0 1117 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 TAS1R1Q7RTX1 841 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 PIK3R5Q8WYR1 880 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 TMEM175Q9BSA9 504 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 BCO2Q9BYV7 579 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
CSTF1-206ENST00000493039 SNX9Q9Y5X1 595 aa10.05□□□□□ -0.8
CSTF1-206ENST00000493039 TRIOBPQ9H2D6 2365 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 REV3LO60673 3130 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 WEE2P0C1S8 567 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 ACO1P21399 889 aaKnown RBP10.04□□□□□ -0.8
CSTF1-206ENST00000493039 TAF6P49848 677 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 FXR1P51114 621 aaKnown RBP eCLIP10.04□□□□□ -0.8
CSTF1-206ENST00000493039 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 FIBCD1Q8N539 461 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 UBR7Q8N806 425 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 KBTBD7Q8WVZ9 684 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 BAP1Q92560 729 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 TAF4BQ92750 862 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 IGSF21Q96ID5 467 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 PBX4Q9BYU1 374 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 SMYD3Q9H7B4 428 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 UBE2TQ9NPD8 197 aaPredicted RBP10.04□□□□□ -0.8
CSTF1-206ENST00000493039 L1RE1Q9UN81 338 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 FAN1Q9Y2M0 1017 aa10.04□□□□□ -0.8
CSTF1-206ENST00000493039 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
CSTF1-206ENST00000493039 M0QZQ0 153 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 HCRTO43612 131 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 CA3P07451 260 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 PNMA6AP0CW24 399 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 PNPLA4P41247 253 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 RAP1GAPP47736 663 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 POLR2FP61218 127 aaKnown RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 GCNT1Q02742 428 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 GOLGA8FQ08AF8 430 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 GOLGA8DPQ0D2H9 430 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 CUL2Q13617 745 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 ZNF667Q5HYK9 610 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 SLC39A11Q8N1S5 342 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 COLGALT1Q8NBJ5 622 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 SENP8Q96LD8 212 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 NT5C1BQ96P26 610 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 NLRC4Q9NPP4 1024 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 DNAJC12Q9UKB3 198 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 ADAM28Q9UKQ2 775 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 FOXN3O00409 490 aaPredicted RBP10.03□□□□□ -0.8
CSTF1-206ENST00000493039 TPM3P06753 285 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 CDC25BP30305 580 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 JAM2P57087 298 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 MYO1EQ12965 1108 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 FIGNQ5HY92 759 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 WDR44Q5JSH3 913 aa10.03□□□□□ -0.8
CSTF1-206ENST00000493039 WSCD1Q658N2 575 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms