RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 E9PCH4 1651 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 SUPT3HO75486 399 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 SEC24DO94855 1032 aaPredicted RBP14.27□□□□□ -0.12
TRIM11-204ENST00000493030 NCAM1P13591 858 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 ITIH2P19823 946 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 BRD2P25440 801 aaKnown RBP14.27□□□□□ -0.12
TRIM11-204ENST00000493030 RPA1P27694 616 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 RAD23BP54727 409 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 UGP2Q16851 508 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 MEI1Q5TIA1 1274 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 CHST13Q8NET6 341 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 HPDLQ96IR7 371 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.12
TRIM11-204ENST00000493030 OSBPL8Q9BZF1 889 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 NPHS2Q9NP85 383 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 DOLKQ9UPQ8 538 aa14.27□□□□□ -0.12
TRIM11-204ENST00000493030 SPATA31A1Q5TZJ5 1347 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 SOX11P35716 441 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 PGM1P36871 562 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 HIC1Q14526 733 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 SH2D3CQ8N5H7 860 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 TBC1D19Q8N5T2 526 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 BHMTQ93088 406 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 TSPAN17Q96FV3 270 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 METTL5Q9NRN9 209 aaKnown RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 TMA16Q96EY4 203 aaKnown RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
TRIM11-204ENST00000493030 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.13
TRIM11-204ENST00000493030 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 GJB7Q6PEY0 223 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CHSY1Q86X52 802 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 SHCBP1Q8NEM2 672 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ZKSCAN4Q969J2 545 aaPredicted RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 KLK14Q9P0G3 267 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ZNF263O14978 683 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CST8O60676 142 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ITGB3P05106 788 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 GPD1P21695 349 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ARL4DP49703 201 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 STX3Q13277 289 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 NR1I3Q14994 352 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 AMHR2Q16671 573 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 SEZ6Q53EL9 994 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CD274Q9NZQ7 290 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CHUKO15111 745 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 GRIN3BO60391 1043 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 AGTP01019 485 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ACADSBP45954 432 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 RARS2Q5T160 578 aaKnown RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CATSPERBQ9H7T0 1116 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 SUPT3HB4E1H0 165 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 C5orf58C9J3I9 102 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 MAFGO15525 162 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 PTRHD1Q6GMV3 140 aaKnown RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ANKRD13AQ8IZ07 590 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CHN1P15882 459 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 DDX5P17844 614 aaKnown RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 PDK1Q15118 436 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 TRADDQ15628 312 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 ABI2Q9NYB9 513 aaPredicted RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
TRIM11-204ENST00000493030 PSMC3IPQ9P2W1 217 aaPredicted RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
TRIM11-204ENST00000493030 CDH16O75309 829 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 HARS2P49590 506 aaKnown RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ABCE1P61221 599 aaKnown RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 PTK7Q13308 1070 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 E4F1Q66K89 784 aaPredicted RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 RASGRP2Q7LDG7 609 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 IFNEQ86WN2 208 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 OR2W6PQ8NHA6 318 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ACSF2Q96CM8 615 aaPredicted RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 YY1AP1Q9H869 796 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 DIP2CQ9Y2E4 1556 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 MED14O60244 1454 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
TRIM11-204ENST00000493030 ALDH1A3P47895 512 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 CPT1AP50416 773 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 GRAMD4Q6IC98 578 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 GOLPH3Q9H4A6 298 aa14.25□□□□□ -0.13
TRIM11-204ENST00000493030 C3orf62Q6ZUJ4 267 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms