RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CCZ1BP86790 482 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 CCZ1P86791 482 aaPredicted RBP23.57■■□□□ 1.36
PSPC1-204ENST00000492741 ZNF394Q53GI3 561 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 C3orf58Q8NDZ4 430 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 APPL2Q8NEU8 664 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 YME1L1Q96TA2 773 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 ZBED2Q9BTP6 218 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 SDCBP2Q9H190 292 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 MTIF3Q9H2K0 278 aaKnown RBP23.57■■□□□ 1.36
PSPC1-204ENST00000492741 DEF6Q9H4E7 631 aa23.57■■□□□ 1.36
PSPC1-204ENST00000492741 PRG3Q9Y2Y8 225 aaPredicted RBP23.57■■□□□ 1.36
PSPC1-204ENST00000492741 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.57■■□□□ 1.36
PSPC1-204ENST00000492741 B4GALT3O60512 393 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 IGFBP6P24592 240 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 SPOUT1Q5T280 376 aaKnown RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 TMEM139Q8IV31 216 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 RBBP8NLQ8NC74 664 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 SENP8Q96LD8 212 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 HAUS4Q9H6D7 363 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 FAN1Q9Y2M0 1017 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 SLC4A7Q9Y6M7 1214 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 SOWAHDA6NJG2 315 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 PLEKP08567 350 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 CDK17Q00537 523 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 PTK2Q05397 1052 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 SOWAHAQ2M3V2 549 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 TTC39CQ8N584 583 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 HERVK_113Q902F9 699 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 CCDC42Q96M95 316 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 NHEJ1Q9H9Q4 299 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 CXXC1Q9P0U4 656 aaPredicted RBP23.56■■□□□ 1.36
PSPC1-204ENST00000492741 ARHGAP20Q9P2F6 1191 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 HCSTQ9UBK5 93 aa23.56■■□□□ 1.36
PSPC1-204ENST00000492741 NRP1O14786 923 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 TADA2AO75478 443 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 KIF4AO95239 1232 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 FECHP22830 423 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 PAX3P23760 479 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 CLCN1P35523 988 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 BPIFB4P59827 614 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 BTG3Q14201 252 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-204ENST00000492741 HGSNATQ68CP4 663 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 OR6B3Q8NGW1 331 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 ZNF689Q96CS4 500 aaPredicted RBP23.55■■□□□ 1.36
PSPC1-204ENST00000492741 COLEC11Q9BWP8 271 aa23.55■■□□□ 1.36
PSPC1-204ENST00000492741 ARHGAP6O43182 974 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 EIF4A3P38919 411 aaKnown RBP23.54■■□□□ 1.36
PSPC1-204ENST00000492741 PRKCIP41743 596 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 BRCC3P46736 316 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 ALDH7A1P49419 539 aaKnown RBP23.54■■□□□ 1.36
PSPC1-204ENST00000492741 PDE6CP51160 858 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 TIGD5Q53EQ6 642 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 DPH6Q7L8W6 267 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 SLC47A2Q86VL8 602 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 TOP6BLQ8N6T0 577 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 UBR7Q8N806 425 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 MRPL45Q9BRJ2 306 aaKnown RBP23.54■■□□□ 1.36
PSPC1-204ENST00000492741 TMEM175Q9BSA9 504 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.54■■□□□ 1.367e-6■□□□□ 8.3
PSPC1-204ENST00000492741 SNX25Q9H3E2 840 aa23.54■■□□□ 1.36
PSPC1-204ENST00000492741 PUF60Q9UHX1 559 aaKnown RBP23.54■■□□□ 1.36
PSPC1-204ENST00000492741 BARX2Q9UMQ3 279 aaPredicted RBP23.54■■□□□ 1.36
PSPC1-204ENST00000492741 F8W810 466 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 SLC11A1P49279 550 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 VPS36Q86VN1 386 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 ADGRF2Q8IZF7 708 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 FAM124BQ9H5Z6 455 aaPredicted RBP23.53■■□□□ 1.36
PSPC1-204ENST00000492741 ACP6Q9NPH0 428 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 L1RE1Q9UN81 338 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 CNTN6Q9UQ52 1028 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 I3L4J1 428 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 AKR1B10O60218 316 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 CILPO75339 1184 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 ITGB1P05556 798 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 ODC1P11926 461 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 CYLC1P35663 651 aaPredicted RBP23.53■■□□□ 1.36
PSPC1-204ENST00000492741 NDST1P52848 882 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 BCAR1P56945 870 aa23.53■■□□□ 1.36
PSPC1-204ENST00000492741 CMTR2Q8IYT2 770 aaKnown RBP23.53■■□□□ 1.36
PSPC1-204ENST00000492741 FNDC1Q4ZHG4 1894 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 SSU72P8A0A1W2PR75 194 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 ARHGEF37A1IGU5 675 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 NT5C1B-RDH14C9J2C7 533 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 TRAPPC3O43617 180 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 TACC1O75410 805 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 GJB5O95377 273 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 GALTP07902 379 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 CYP11B1P15538 503 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 GNL1P36915 607 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 AARSP49588 968 aaKnown RBP eCLIP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 WSCD1Q658N2 575 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 ZNF571Q7Z3V5 609 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 CCDC170Q8IYT3 715 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 PDCL2Q8N4E4 241 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 SLC9A7Q96T83 725 aa23.52■■□□□ 1.36
PSPC1-204ENST00000492741 SEPT11Q9NVA2 429 aaKnown RBP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 TIMM13Q9Y5L4 95 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-204ENST00000492741 A8MXQ7 604 aa23.51■■□□□ 1.35
PSPC1-204ENST00000492741 TMEM189-UBE2V1I3L0A0 370 aa23.51■■□□□ 1.35
PSPC1-204ENST00000492741 CALCAP01258 141 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms