RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 ATP6V1DQ9Y5K8 247 aa25.57■■□□□ 1.68
CTDSP1-211ENST00000492545 CYB561D2O14569 222 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 TFAMQ00059 246 aaKnown RBP25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 SURF1Q15526 300 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 SV2CQ496J9 727 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 EPM2AIP1Q7L775 607 aaPredicted RBP25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 CEP57L1Q8IYX8 460 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 THEM5Q8N1Q8 247 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 CORO1BQ9BR76 489 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 UBE4BO95155 1302 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 DOCK6Q96HP0 2047 aa25.56■■□□□ 1.68
CTDSP1-211ENST00000492545 ZNF233A6NK53 670 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 KPNA7A9QM74 516 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 NARSO43776 548 aaKnown RBP25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 SLFN14P0C7P3 912 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 CMA1P23946 247 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 KRT85P78386 507 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 EHHADHQ08426 723 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 TWF1Q12792 350 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 SMARCB1Q12824 385 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 PARM1Q6UWI2 310 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 BORCS6Q96GS4 357 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 PCIF1Q9H4Z3 704 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 USP25Q9UHP3 1055 aa25.55■■□□□ 1.68
CTDSP1-211ENST00000492545 PRSS36Q5K4E3 855 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 CENPPQ6IPU0 288 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 PDZD4Q76G19 769 aaPredicted RBP25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 SIX5Q8N196 739 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 LRRC52Q8N7C0 313 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 FGF14Q92915 247 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 HPS3Q969F9 1004 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 CGNQ9P2M7 1197 aaKnown RBP25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 ITGA11Q9UKX5 1188 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 ASB3Q9Y575 518 aa25.54■■□□□ 1.68
CTDSP1-211ENST00000492545 GOLGA8IPA6NC78 632 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 GOLGA8JA6NMD2 632 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 CFHP08603 1231 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 ALDH1A3P47895 512 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 EPHB3P54753 998 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 EPHA5P54756 1037 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 NHLH1Q02575 133 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 DUSP4Q13115 394 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 GLIS3Q8NEA6 775 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 C2orf15Q8WU43 125 aaKnown RBP25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 RTP3Q9BQQ7 232 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 YIPF1Q9Y548 306 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 CACNA1HO95180 2353 aa25.53■■□□□ 1.68
CTDSP1-211ENST00000492545 ECI2O75521 394 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 OR4Q2P0C623 313 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 HOXD13P35453 343 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 TUFMP49411 452 aaKnown RBP25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 RBP5P82980 135 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 SLC5A9Q2M3M2 681 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 HS2ST1Q7LGA3 356 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 C1orf127Q8N9H9 656 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 ZSWIM2Q8NEG5 633 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 PRSS33Q8NF86 280 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 FLCNQ8NFG4 579 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 LEO1Q8WVC0 666 aaPredicted RBP25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 SPATA32Q96LK8 384 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 PGLYRP2Q96PD5 576 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 ZCWPW1Q9H0M4 648 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 PDE11AQ9HCR9 933 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 ASAH2Q9NR71 780 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 HSPBP1Q9NZL4 362 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 CEP72Q9P209 647 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 AGAP1Q9UPQ3 857 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 ZDHHC9Q9Y397 364 aa25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 R3HCC1Q9Y3T6 440 aaKnown RBP25.52■■□□□ 1.68
CTDSP1-211ENST00000492545 MTMR11A4FU01 709 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 MYL1P05976 194 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 NPR3P17342 541 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 AOC1P19801 751 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 HOXD11P31277 338 aaPredicted RBP25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 AFMP43652 599 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 PFKPQ01813 784 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 BMT2Q1RMZ1 405 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 CSGALNACT2Q8N6G5 542 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 TMEM105Q8N8V8 129 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 SPATA18Q8TC71 538 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 NOC3LQ8WTT2 800 aaKnown RBP25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 SCFD1Q8WVM8 642 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 ING5Q8WYH8 240 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 MCRS1Q96EZ8 462 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 SHDQ96IW2 340 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 RPP25Q9BUL9 199 aaKnown RBP25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 GPR88Q9GZN0 384 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 SCAND2PQ9GZW5 306 aaPredicted RBP25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 NOTCH4Q99466 2003 aa25.51■■□□□ 1.67
CTDSP1-211ENST00000492545 TULP1O00294 542 aaPredicted RBP25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 GALR2O43603 387 aaPredicted RBP25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 VNN2O95498 520 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 ITGB3P05106 788 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 TMEM191BP0C7N4 346 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 ANK1P16157 1881 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 POLR2BP30876 1174 aaKnown RBP25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 WNT7BP56706 349 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 CUL4BQ13620 913 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 DUOXA2Q1HG44 320 aa25.5■■□□□ 1.67
CTDSP1-211ENST00000492545 WSCD1Q658N2 575 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms