RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 LRRC3Q9BY71 257 aa14.33□□□□□ -0.12
HDAC3-213ENST00000492506 CDT1Q9H211 546 aa14.33□□□□□ -0.12
HDAC3-213ENST00000492506 AFF4Q9UHB7 1163 aaKnown RBP14.33□□□□□ -0.12
HDAC3-213ENST00000492506 TNFSF13BQ9Y275 285 aa14.33□□□□□ -0.12
HDAC3-213ENST00000492506 H7C4K7 107 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 VNN2O95498 520 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 MYL4P12829 197 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 KCNE1P15382 129 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 RPA1P27694 616 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 HOXA6P31267 233 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 EFNA5P52803 228 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 LIMK1P53667 647 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 FCHO2Q0JRZ9 810 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 TEAD2Q15562 447 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 N4BP2L1Q5TBK1 243 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-213ENST00000492506 HEATR6Q6AI08 1181 aaKnown RBP14.32□□□□□ -0.12
HDAC3-213ENST00000492506 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 LEMD2Q8NC56 503 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 WASF1Q92558 559 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 MSANTD3Q96H12 275 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-213ENST00000492506 LRRC3BQ96PB8 259 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 ACO2Q99798 780 aaKnown RBP14.32□□□□□ -0.12
HDAC3-213ENST00000492506 RALYQ9UKM9 306 aaKnown RBP14.32□□□□□ -0.12
HDAC3-213ENST00000492506 ANGPTL2Q9UKU9 493 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 MYH11P35749 1972 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 ATRXP46100 2492 aa14.32□□□□□ -0.12
HDAC3-213ENST00000492506 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 SLC38A8A6NNN8 435 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 ABLIM1O14639 778 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 CHADO15335 359 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 FOXD2O60548 495 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 SHC2P98077 582 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 LRRC32Q14392 662 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 ECM1Q16610 540 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 CTXN3Q4LDR2 81 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 C1orf228Q6PIY5 440 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 RNF19BQ6ZMZ0 732 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 TMC8Q8IU68 726 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 ELMOD1Q8N336 334 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF397Q8NF99 534 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 BEST2Q8NFU1 509 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 GPT2Q8TD30 523 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 DDX1Q92499 740 aaKnown RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 E2F7Q96AV8 911 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 ASAH2Q9NR71 780 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 TOPORSQ9NS56 1045 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-213ENST00000492506 RXFP3Q9NSD7 469 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 MAFFQ9ULX9 164 aa14.31□□□□□ -0.12
HDAC3-213ENST00000492506 SYCE3A1L190 88 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 K7ERI5 159 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 PRPF40AO75400 957 aaKnown RBP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 PROZP22891 400 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 U2AF2P26368 475 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 CTHP32929 405 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 RPL9P32969 192 aaKnown RBP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 YARSP54577 528 aaKnown RBP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 OSTNP61366 133 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 CCINQ13939 588 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 SF3A2Q15428 464 aaKnown RBP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF280DQ6N043 979 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 TAS1R3Q7RTX0 852 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 WDR5BQ86VZ2 330 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 CSGALNACT1Q8TDX6 532 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 DDX12PQ92771 950 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 MKNK1Q9BUB5 465 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 GPR88Q9GZN0 384 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 DNAJC25Q9H1X3 360 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 CRISPLD1Q9H336 500 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 C8orf33Q9H7E9 229 aaPredicted RBP14.3□□□□□ -0.12
HDAC3-213ENST00000492506 TMEM63CQ9P1W3 806 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
HDAC3-213ENST00000492506 ZNF638Q14966 1978 aaKnown RBP14.29□□□□□ -0.12
HDAC3-213ENST00000492506 A0A1W2PRU2 124 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 SPECC1L-ADORA2AF8WAN1 911 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 RIOK3O14730 519 aaKnown RBP14.29□□□□□ -0.12
HDAC3-213ENST00000492506 MCM7P33993 719 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 STXBP5Q5T5C0 1151 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
HDAC3-213ENST00000492506 RALGPS2Q86X27 583 aaPredicted RBP14.29□□□□□ -0.12
HDAC3-213ENST00000492506 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 IFT74Q96LB3 600 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 GTSE1Q9NYZ3 720 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 YIPF1Q9Y548 306 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 NUB1Q9Y5A7 615 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 AKAP13Q12802 2813 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 TSC2P49815 1807 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 KIAA1549LQ6ZVL6 1849 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 OBSL1O75147 1896 aa14.29□□□□□ -0.12
HDAC3-213ENST00000492506 MYO16Q9Y6X6 1858 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms