RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 MCM3P25205 808 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CIITAP33076 1130 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ABCD1P33897 745 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 IGFALSP35858 605 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC16A2P36021 539 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC1A4P43007 532 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KIF11P52732 1056 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ERVK-21P61565 698 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 VSNL1P62760 191 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SUMO1P63165 101 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KCNC4Q03721 635 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SPIRE1Q08AE8 756 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KCNMA1Q12791 1236 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KIF5AQ12840 1032 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 FAPQ12884 760 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 COX10Q12887 443 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CDC16Q13042 620 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SEMA5AQ13591 1074 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SPARCL1Q14515 664 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SPA17Q15506 151 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TAF5Q15542 800 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ASTE1Q2TB18 679 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 EDRF1Q3B7T1 1238 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CERKLQ49MI3 558 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 Q4G0T1 1027 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 DGKKQ5KSL6 1271 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CCDC122Q5T0U0 273 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TAF3Q5VWG9 929 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 HAUS3Q68CZ6 603 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 STYK1Q6J9G0 422 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 DARS2Q6PI48 645 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CNSTQ6PJW8 725 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 BTNL9Q6UXG8 535 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TMEM179Q6ZVK1 233 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SYDE1Q6ZW31 735 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KCTD1Q719H9 257 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ZNF771Q7L3S4 317 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 HDXQ7Z353 690 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 REC114Q7Z4M0 266 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CCDC91Q7Z6B0 441 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 COL23A1Q86Y22 540 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PTRH1Q86Y79 214 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SIAH1Q8IUQ4 282 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 EPHX4Q8IUS5 362 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SLC44A2Q8IWA5 706 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TRIM59Q8IWR1 403 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 RTKN2Q8IZC4 609 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 NXPE1Q8N323 547 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TXLNBQ8N3L3 684 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CCDC155Q8N6L0 562 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 NOA1Q8NC60 698 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ZBTB34Q8NCN2 500 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 GMCL1P1Q8NEA9 526 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 FLAD1Q8NFF5 587 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TRIM58Q8NG06 486 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 GABPB2Q8TAK5 448 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ETNPPLQ8TBG4 499 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 GIMAP1Q8WWP7 306 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 RUBCNQ92622 972 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SYN2Q92777 582 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KHSRPQ92945 711 aaKnown RBP eCLIP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 HPS3Q969F9 1004 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 GMCL1Q96IK5 515 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CNDP2Q96KP4 475 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CCDC42Q96M95 316 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 FAM20AQ96MK3 541 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 UROC1Q96N76 676 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 MOGAT1Q96PD6 335 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 P2RX7Q99572 595 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ACO2Q99798 780 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 AARSD1Q9BTE6 412 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 MXD3Q9BW11 206 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 NIFKQ9BYG3 293 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ANO3Q9BYT9 981 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PHACTR1Q9C0D0 580 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CEP44Q9C0F1 390 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 LACRTQ9GZZ8 138 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 NUCKS1Q9H1E3 243 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 MIR1-1HGQ9H1L0 117 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 VPS33BQ9H267 617 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KCTD10Q9H3F6 313 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SMOC1Q9H4F8 434 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 SH2D4AQ9H788 454 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 VIPAS39Q9H9C1 493 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ELP3Q9H9T3 547 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 CERS4Q9HA82 394 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ABCB6Q9NP58 842 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PANK4Q9NVE7 773 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 KCTD5Q9NXV2 234 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 UTP6Q9NYH9 597 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PI4KBQ9UBF8 816 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 FAM184BQ9ULE4 1060 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 GUCA1BQ9UMX6 200 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHB10Q9UN67 800 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHA12Q9UN75 941 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 MAGED2Q9UNF1 606 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 TRAF3IP3Q9Y228 551 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHB14Q9Y5E9 798 aa4.05□□□□□ -1.76
ATPAF1-206ENST00000492233 PCDHA13Q9Y5I0 950 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms