RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 PAGE5Q96GU1 130 aa16.29■□□□□ 0.2
USP39-217ENST00000491659 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
USP39-217ENST00000491659 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
USP39-217ENST00000491659 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
USP39-217ENST00000491659 DNMT3BQ9UBC3 853 aaKnown RBP16.29■□□□□ 0.2
USP39-217ENST00000491659 MRPS23Q9Y3D9 190 aaKnown RBP16.29■□□□□ 0.2
USP39-217ENST00000491659 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
USP39-217ENST00000491659 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 CYB561D2O14569 222 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 SEC24AO95486 1093 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 CYP11A1P05108 521 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 MYL1P05976 194 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 RHOP08100 348 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 HOXD13P35453 343 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 SYKP43405 635 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 SNRPFP62306 86 aaKnown RBP16.28■□□□□ 0.2
USP39-217ENST00000491659 TWF1Q12792 350 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 GPR17Q13304 367 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 PLD1Q13393 1074 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 BMT2Q1RMZ1 405 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 MTSS1LQ765P7 747 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 RSAD2Q8WXG1 361 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 FGF13Q92913 245 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 ANKRD36BP1Q96IX9 119 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 PGLYRP2Q96PD5 576 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 KCNH6Q9H252 994 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
USP39-217ENST00000491659 FBXL21Q9UKT6 434 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 ITGA11Q9UKX5 1188 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 HPSEQ9Y251 543 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
USP39-217ENST00000491659 YIPF1Q9Y548 306 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 ZNF318Q5VUA4 2279 aa16.28■□□□□ 0.2
USP39-217ENST00000491659 TRIOO75962 3097 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 TNNC2P02585 160 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 KRT19P08727 400 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 HTR4Q13639 388 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 CBWD2Q8IUF1 395 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 C1orf127Q8N9H9 656 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 ITFG1Q8TB96 612 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 ING5Q8WYH8 240 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 ZNF512Q96ME7 567 aaPredicted RBP16.27■□□□□ 0.2
USP39-217ENST00000491659 CORO1BQ9BR76 489 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 MFSD1Q9H3U5 465 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 AVENQ9NQS1 362 aaPredicted RBP16.27■□□□□ 0.2
USP39-217ENST00000491659 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.2
USP39-217ENST00000491659 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 MTMR11A4FU01 709 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 ANHXE9PGG2 379 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 ZNF197O14709 1029 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 CLIC2O15247 247 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 CYP2J2P51589 502 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 NUCB2P80303 420 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 BFSP1Q12934 665 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 PSMD2Q13200 908 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
USP39-217ENST00000491659 KNOP1Q1ED39 458 aaKnown RBP16.26■□□□□ 0.19
USP39-217ENST00000491659 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 PDZD4Q76G19 769 aaPredicted RBP16.26■□□□□ 0.19
USP39-217ENST00000491659 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 LRRC52Q8N7C0 313 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 XXYLT1Q8NBI6 393 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 LEMD2Q8NC56 503 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 GOLGA5Q8TBA6 731 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 CCDC47Q96A33 483 aaKnown RBP16.26■□□□□ 0.19
USP39-217ENST00000491659 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 ASAH2Q9NR71 780 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 INTS13Q9NVM9 706 aa16.26■□□□□ 0.19
USP39-217ENST00000491659 NARSO43776 548 aaKnown RBP16.25■□□□□ 0.19
USP39-217ENST00000491659 KLRC4O43908 158 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 PDGFBP01127 241 aaPredicted RBP16.25■□□□□ 0.19
USP39-217ENST00000491659 SRFP11831 508 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 ALDH1A3P47895 512 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 NDUFA8P51970 172 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 EPHB3P54753 998 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 RBP5P82980 135 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 DUSP4Q13115 394 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 SLC5A9Q2M3M2 681 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 KMT5BQ4FZB7 885 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 SLC39A12Q504Y0 691 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 LMBRD2Q68DH5 695 aaPredicted RBP16.25■□□□□ 0.19
USP39-217ENST00000491659 WDR49Q8IV35 697 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 SLC44A3Q8N4M1 653 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 OR10T2Q8NGX3 314 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 BORCS6Q96GS4 357 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms