RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 GRXCR1A8MXD5 290 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 F8W810 466 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 CYB561D2O14569 222 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 TACC1O75410 805 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 GYPCP04921 128 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 PBX3P40426 434 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 BRCC3P46736 316 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 TBX2Q13207 712 aaPredicted RBP19.95■□□□□ 0.78
MCF2L-230ENST00000491028 TIGD5Q53EQ6 642 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 FUT10Q6P4F1 479 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 CHRDL2Q6WN34 429 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 SCARA5Q6ZMJ2 495 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 RRAGAQ7L523 313 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 PPFIBP1Q86W92 1011 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 DRC7Q8IY82 874 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 APPL2Q8NEU8 664 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 IGSF21Q96ID5 467 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 SAMD11Q96NU1 681 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 MMS19Q96T76 1030 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 STK33Q9BYT3 514 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 IMPACTQ9P2X3 320 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 STK39Q9UEW8 545 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 DSEQ9UL01 958 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 MYO6Q9UM54 1294 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 PCDHB8Q9UN66 801 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 A0A1W2PPC1 479 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 GOLGA6L6A8MZA4 724 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 NT5C1B-RDH14C9J2C7 533 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 CYP11A1P05108 521 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 RAPGEF1Q13905 1077 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 SOWAHAQ2M3V2 549 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 FMNL3Q8IVF7 1028 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 TMEM86AQ8N2M4 240 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 ZNF397Q8NF99 534 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-230ENST00000491028 KAT5Q92993 513 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 TMEM169Q96HH4 297 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 KREMEN1Q96MU8 473 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 SPAG5Q96R06 1193 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 ARID3AQ99856 593 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 SMYD3Q9H7B4 428 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 NLRC4Q9NPP4 1024 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 MSRAQ9UJ68 235 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 AJAP1Q9UKB5 411 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-230ENST00000491028 CAPN11Q9UMQ6 739 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 L1RE1Q9UN81 338 aa19.94■□□□□ 0.78
MCF2L-230ENST00000491028 SYN3O14994 580 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 EFEMP2O95967 443 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 CA3P07451 260 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 TYMPP19971 482 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 IGFBP6P24592 240 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-230ENST00000491028 JAM2P57087 298 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 INCA1Q0VD86 236 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 ARHGAP44Q17R89 818 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-230ENST00000491028 TMEM173Q86WV6 379 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-230ENST00000491028 RNF168Q8IYW5 571 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-230ENST00000491028 UBR7Q8N806 425 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 BCL7CQ8WUZ0 217 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-230ENST00000491028 SHC3Q92529 594 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 BAP1Q92560 729 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 PLVAPQ9BX97 442 aa19.93■□□□□ 0.78
MCF2L-230ENST00000491028 C5orf67F2Z3F1 127 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 F8VZ95 297 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 WARSP23381 471 aaKnown RBP19.92■□□□□ 0.78
MCF2L-230ENST00000491028 CASP14P31944 242 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 BMPR1AP36894 532 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 ZBED6P86452 979 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 PLCB3Q01970 1234 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 DRAP1Q14919 205 aaPredicted RBP19.92■□□□□ 0.78
MCF2L-230ENST00000491028 METTL23Q86XA0 190 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 CNGA4Q8IV77 575 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 ADGRF2Q8IZF7 708 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 PDCL2Q8N4E4 241 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 KBTBD7Q8WVZ9 684 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 PBX4Q9BYU1 374 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 SDCBP2Q9H190 292 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 NUCKS1Q9H1E3 243 aaKnown RBP19.92■□□□□ 0.78
MCF2L-230ENST00000491028 CISHQ9NSE2 258 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 LUC7L2Q9Y383 392 aaKnown RBP19.92■□□□□ 0.78
MCF2L-230ENST00000491028 VWA8A3KMH1 1905 aa19.92■□□□□ 0.78
MCF2L-230ENST00000491028 I3L4J1 428 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 RB1P06400 928 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 WEE2P0C1S8 567 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 MYOGP15173 224 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 ACO1P21399 889 aaKnown RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 FGFR3P22607 806 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 CTNNB1P35222 781 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 STAT1P42224 750 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 RAP1GAPP47736 663 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 FXR1P51114 621 aaKnown RBP eCLIP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 SMAD3P84022 425 aaKnown RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 KRT17Q04695 432 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 PDXDC1Q6P996 788 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 UNC93AQ86WB7 457 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 TGS1Q96RS0 853 aaKnown RBP19.91■□□□□ 0.78
MCF2L-230ENST00000491028 HERC2P3Q9BVR0 1158 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 GPR62Q9BZJ7 368 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 GPR88Q9GZN0 384 aa19.91■□□□□ 0.78
MCF2L-230ENST00000491028 DNAI2Q9GZS0 605 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms