RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 CYP4F8P98187 520 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 GUCY1B3Q02153 619 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 YWHAHQ04917 246 aaPredicted RBP16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 C1orf228Q6PIY5 440 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 GAREM2Q75VX8 874 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 ZBTB45Q96K62 511 aaPredicted RBP16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 TCHPQ9BT92 498 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 ATXN3LQ9H3M9 355 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 DPYSL4O14531 572 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 MCF2P10911 925 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 SPINK2P20155 84 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 RAP1GAPP47736 663 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 EPHB3P54753 998 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 ZNF174Q15697 407 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 GPR158Q5T848 1215 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 MPZL3Q6UWV2 235 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 CACNA2D4Q7Z3S7 1137 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 DAW1Q8N136 415 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 BEST2Q8NFU1 509 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 GPR88Q9GZN0 384 aa16.72■□□□□ 0.27
SCAMP3-208ENST00000490999 AKAP13Q12802 2813 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 GIPC1O14908 333 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 HIP1RO75146 1068 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 PROS1P07225 676 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 CXCL8P10145 99 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 PROZP22891 400 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 GABRR2P28476 465 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 HOXA6P31267 233 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 CACNB1Q02641 598 aaPredicted RBP16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 PLD1Q13393 1074 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 TRIM29Q14134 588 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 ME3Q16798 604 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 HAUS6Q7Z4H7 955 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 HHIPQ96QV1 700 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 TMEM209Q96SK2 561 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 LPIN3Q9BQK8 851 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 RUSC1Q9BVN2 902 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 ARHGAP28Q9P2N2 729 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 MAFFQ9ULX9 164 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 KIAA1024Q9UPX6 916 aa16.71■□□□□ 0.27
SCAMP3-208ENST00000490999 PKD1L2Q7Z442 2459 aa16.71■□□□□ 0.26
SCAMP3-208ENST00000490999 GREB1Q4ZG55 1949 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 RALGAPA1Q6GYQ0 2036 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 MTMR11A4FU01 709 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 SLC16A4O15374 487 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 NOVA1P51513 510 aaKnown RBP16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 FOXC1Q12948 553 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 NBR1Q14596 966 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 PLA2G2CQ5R387 149 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 RNF43Q68DV7 783 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 UNQ6494/PRO21346Q6UXR6 183 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 CHFRQ96EP1 664 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 EDEM2Q9BV94 578 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 ZMIZ1Q9ULJ6 1067 aa16.7■□□□□ 0.26
SCAMP3-208ENST00000490999 E9PMD0 336 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 M0QZQ0 153 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 PPEF2O14830 753 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 DCLK1O15075 740 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.267e-8■□□□□ 11
SCAMP3-208ENST00000490999 MAPK7Q13164 816 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 NOLC1Q14978 699 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 TRIM68Q6AZZ1 485 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 CENPPQ6IPU0 288 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 FSTL4Q6MZW2 842 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 DNAJB7Q7Z6W7 309 aaPredicted RBP16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 USP37Q86T82 979 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 LOXL4Q96JB6 756 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 SEPT5Q99719 369 aaPredicted RBP16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 SLC8A2Q9UPR5 921 aa16.69■□□□□ 0.26
SCAMP3-208ENST00000490999 OTOL1A6NHN0 477 aaPredicted RBP16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 RNF40O75150 1001 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 OAZ2O95190 189 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 TOP3BO95985 862 aaKnown RBP16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 MCM2P49736 904 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 ZNF252P-AS1Q0IIN9 211 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 ITPRIPL2Q3MIP1 535 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 ARHGAP15Q53QZ3 475 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 SYNPOQ8N3V7 929 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 SNX29Q8TEQ0 813 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 PSMG2Q969U7 264 aa16.68■□□□□ 0.26
SCAMP3-208ENST00000490999 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms