RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 ARMCX5Q6P1M9 558 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 NT5DC4Q86YG4 428 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 ZNF512Q96ME7 567 aaPredicted RBP19.75■□□□□ 0.75
SBDS-204ENST00000490953 PYM1Q9BRP8 204 aaKnown RBP19.75■□□□□ 0.75
SBDS-204ENST00000490953 CBWD1Q9BRT8 395 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 TRIM9Q9C026 710 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 IRF2BPLQ9H1B7 796 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 ARHGEF3Q9NR81 526 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 RBAKQ9NYW8 714 aaPredicted RBP19.75■□□□□ 0.75
SBDS-204ENST00000490953 GDE1Q9NZC3 331 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 WDFY4Q6ZS81 3184 aa19.75■□□□□ 0.75
SBDS-204ENST00000490953 GOLGA8IPA6NC78 632 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 GOLGA8JA6NMD2 632 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 ZNF197O14709 1029 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 TFAMQ00059 246 aaKnown RBP19.74■□□□□ 0.75
SBDS-204ENST00000490953 GPR17Q13304 367 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 CYP4A22Q5TCH4 519 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 METTL23Q86XA0 190 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 HPS3Q969F9 1004 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 TCEAL4Q96EI5 215 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 ZNF560Q96MR9 790 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 PHOX2BQ99453 314 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 RTP3Q9BQQ7 232 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 PCIF1Q9H4Z3 704 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 TBC1D17Q9HA65 648 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 FAM86C1Q9NVL1 165 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 CEP72Q9P209 647 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 DSEQ9UL01 958 aa19.74■□□□□ 0.75
SBDS-204ENST00000490953 H0Y858 1186 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 CYB561D2O14569 222 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 POLR2DO15514 142 aaKnown RBP19.73■□□□□ 0.75
SBDS-204ENST00000490953 PI15O43692 258 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 EXTL3O43909 919 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 VNN2O95498 520 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 CYP11A1P05108 521 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 WNT7BP56706 349 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 GPC5P78333 572 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 PLD1Q13393 1074 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 SV2CQ496J9 727 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 ATL3Q6DD88 541 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 HS6ST3Q8IZP7 471 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 GLIS3Q8NEA6 775 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 ATOH1Q92858 354 aaPredicted RBP19.73■□□□□ 0.75
SBDS-204ENST00000490953 TMEM209Q96SK2 561 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 MAGEF1Q9HAY2 307 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 ASAH2Q9NR71 780 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 FAM13BQ9NYF5 915 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 CFAP45Q9UL16 551 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 PCDHA7Q9UN72 937 aa19.73■□□□□ 0.75
SBDS-204ENST00000490953 MTMR11A4FU01 709 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 MYL4P12829 197 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 CCR2P41597 374 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
SBDS-204ENST00000490953 DUSP4Q13115 394 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 GPD1LQ8N335 351 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 LEMD2Q8NC56 503 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 OR10T2Q8NGX3 314 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 CACTINQ8WUQ7 758 aaKnown RBP19.72■□□□□ 0.75
SBDS-204ENST00000490953 CRISPLD1Q9H336 500 aa19.72■□□□□ 0.75
SBDS-204ENST00000490953 KIAA0391O15091 583 aaKnown RBP19.71■□□□□ 0.75
SBDS-204ENST00000490953 ECI2O75521 394 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 MICAL2O94851 1124 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 ITGB3P05106 788 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 POLR2BP30876 1174 aaKnown RBP19.71■□□□□ 0.75
SBDS-204ENST00000490953 PNPLA4P41247 253 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 ALDH1A3P47895 512 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 EPHB3P54753 998 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 FAM26FQ5R3K3 315 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 CENPPQ6IPU0 288 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 CNNM4Q6P4Q7 775 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 THEM5Q8N1Q8 247 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 ATAD1Q8NBU5 361 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 C7orf25Q9BPX7 421 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 SLC27A5Q9Y2P5 690 aa19.71■□□□□ 0.75
SBDS-204ENST00000490953 KPNA7A9QM74 516 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 EIF3DO15371 548 aaKnown RBP eCLIP19.7■□□□□ 0.74
SBDS-204ENST00000490953 EPHA5P54756 1037 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 SLC39A12Q504Y0 691 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 WSCD1Q658N2 575 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 PHLDB3Q6NSJ2 640 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 POTEHQ6S545 545 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 CCDC105Q8IYK2 499 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 TTC9BQ8N6N2 239 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 C1orf127Q8N9H9 656 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 ZCWPW1Q9H0M4 648 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 PDE11AQ9HCR9 933 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 AGAP1Q9UPQ3 857 aa19.7■□□□□ 0.74
SBDS-204ENST00000490953 COL4A3Q01955 1670 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 MIA3Q5JRA6 1907 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.69■□□□□ 0.74
SBDS-204ENST00000490953 NRG2O14511 850 aaPredicted RBP19.69■□□□□ 0.74
SBDS-204ENST00000490953 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 GJA1P17302 382 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 CASP1P29466 404 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 PFKPQ01813 784 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 SNW1Q13573 536 aaKnown RBP19.69■□□□□ 0.74
SBDS-204ENST00000490953 TANGO2Q6ICL3 276 aa19.69■□□□□ 0.74
SBDS-204ENST00000490953 UNC13DQ70J99 1090 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms