RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 GALK1P51570 392 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 PTK6Q13882 451 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ZC2HC1CQ53FD0 456 aaPredicted RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 XKR9Q5GH70 373 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 DSTYKQ6XUX3 929 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 CROCCP3Q8IVE0 287 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 KCTD6Q8NC69 237 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ZDHHC18Q9NUE0 388 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ARL8BQ9NVJ2 186 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ADA2Q9NZK5 511 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 IP6K2Q9UHH9 426 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 NCANO14594 1321 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ADGRA3Q8IWK6 1321 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 FOXO6A8MYZ6 492 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 PSMC3P17980 439 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 CCNFP41002 786 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 CCNG2Q16589 344 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 ISLR2Q6UXK2 745 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 KCNK18Q7Z418 384 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 RCOR2Q8IZ40 523 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 CHST7Q9NS84 486 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 HERC5Q9UII4 1024 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 RNF103-CHMP3A0A140T963 221 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SLC26A4O43511 780 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 WEE2P0C1S8 567 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 YY1P25490 414 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SP4Q02446 784 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 DMP1Q13316 513 aaPredicted RBP11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 DCLK3Q9C098 648 aa11.85□□□□□ -0.51
CRNKL1-204ENST00000490910 AIM2O14862 343 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 MAP4P27816 1152 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 LIG4P49917 911 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 FLOT2Q14254 428 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 KIF22Q14807 665 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 TEDDM1Q5T9Z0 273 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 DHDDSQ86SQ9 333 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 TRABD2AQ86V40 505 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 CIDEBQ9UHD4 219 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 ARHGAP26Q9UNA1 814 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 TRIM49D1C9J1S8 452 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 HSPA8P11142 646 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 BMP3P12645 472 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 VCAM1P19320 739 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 MAGEA8P43361 318 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 FOXR2Q6PJQ5 311 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 VSTM1Q6UX27 236 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 EIF2AK1Q9BQI3 630 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 ZNF577Q9BSK1 485 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 CADM1Q9BY67 442 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 KIAA1586Q9HCI6 787 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 ZHX2Q9Y6X8 837 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 PMLP29590 882 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 TRIM16LQ309B1 348 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 RBM12BQ8IXT5 1001 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 PREX1Q8TCU6 1659 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 PAIP1Q9H074 479 aaKnown RBP11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 VPS11Q9H270 941 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 GRHL1Q9NZI5 618 aa11.84□□□□□ -0.51
CRNKL1-204ENST00000490910 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.521e-7■□□□□ 8.6
CRNKL1-204ENST00000490910 TBX10O75333 385 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 SGPL1O95470 568 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ZBED1O96006 694 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 RAG1P15918 1043 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 FGFR2P21802 821 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ATXN3P54252 364 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 MORF4L2Q15014 288 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ZDHHC24Q6UX98 284 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 GPR141Q7Z602 305 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 FAM84BQ96KN1 310 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 KLC2Q9H0B6 622 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 LRRC19Q9H756 370 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 PALMDQ9NP74 551 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 PCMTD2Q9NV79 361 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 TAS2R14Q9NYV8 317 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 E2F6O75461 281 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms