RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	PARD3B	Q8TEW8	1205 aa		20.01	■□□□□ 0.79
C4A-256	ENST00000490663	UHRF1	Q96T88	793 aa	Predicted RBP	20.01	■□□□□ 0.79
C4A-256	ENST00000490663	POMK	Q9H5K3	350 aa		20.01	■□□□□ 0.79
C4A-256	ENST00000490663	MMRN2	Q9H8L6	949 aa		20.01	■□□□□ 0.79
C4A-256	ENST00000490663	SFXN1	Q9H9B4	322 aa		20.01	■□□□□ 0.79
C4A-256	ENST00000490663	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	20.01	■□□□□ 0.79
C4A-256	ENST00000490663	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	20.01	■□□□□ 0.79
C4A-256	ENST00000490663	BACE2	Q9Y5Z0	518 aa		20.01	■□□□□ 0.79
C4A-256	ENST00000490663	PATJ	Q8NI35	1801 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663		H7C4K7	107 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	HCRT	O43612	131 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	CST3	P01034	146 aa	Predicted RBP	20	■□□□□ 0.79
C4A-256	ENST00000490663	CPB1	P15086	417 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	STX17	P56962	302 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	RBP5	P82980	135 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	ADAM9	Q13443	819 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	RAB33A	Q14088	237 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	C1orf220	Q5T0J3	134 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	TDRD10	Q5VZ19	366 aa	Known RBP	20	■□□□□ 0.79
C4A-256	ENST00000490663	FAM186B	Q8IYM0	893 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	SUSD6	Q92537	303 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	PGLYRP2	Q96PD5	576 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	CD320	Q9NPF0	282 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	L1RE1	Q9UN81	338 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	FRMD4B	Q9Y2L6	1034 aa		20	■□□□□ 0.79
C4A-256	ENST00000490663	KIF26A	Q9ULI4	1882 aa	Predicted RBP	19.99	■□□□□ 0.79
C4A-256	ENST00000490663	CCDC195	A0A1B0GUA6	201 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	PPP1R3G	B7ZBB8	358 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	CLSTN1	O94985	981 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	C8A	P07357	584 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	HOXB8	P17481	243 aa	Predicted RBP	19.99	■□□□□ 0.79
C4A-256	ENST00000490663	BIRC3	Q13489	604 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	COBLL1	Q53SF7	1204 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	CENPP	Q6IPU0	288 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	RNF19B	Q6ZMZ0	732 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	OSTM1	Q86WC4	334 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	OR10T2	Q8NGX3	314 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	SLC7A14	Q8TBB6	771 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	HPDL	Q96IR7	371 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	RTP3	Q9BQQ7	232 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	KIAA1468	Q9P260	1216 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	SNX9	Q9Y5X1	595 aa		19.99	■□□□□ 0.79
C4A-256	ENST00000490663	NUP210	Q8TEM1	1887 aa	Predicted RBP	19.99	■□□□□ 0.79
C4A-256	ENST00000490663	CCL16	O15467	120 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	PHACTR2	O75167	634 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	SEC24A	O95486	1093 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	VNN2	O95498	520 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	TYMP	P19971	482 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	CCNE1	P24864	410 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	MYL6	P60660	151 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	CBX2	Q14781	532 aa	Predicted RBP	19.98	■□□□□ 0.79
C4A-256	ENST00000490663	NFIL3	Q16649	462 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	CCDC142	Q17RM4	750 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	EDRF1	Q3B7T1	1238 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	PUS10	Q3MIT2	529 aa	Known RBP	19.98	■□□□□ 0.79
C4A-256	ENST00000490663	LIN9	Q5TKA1	542 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	SLC8B1	Q6J4K2	584 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	CES5A	Q6NT32	575 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	LRRC52	Q8N7C0	313 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	NELFB	Q8WX92	580 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	ZNF707	Q96C28	371 aa	Predicted RBP	19.98	■□□□□ 0.79
C4A-256	ENST00000490663	TSG101	Q99816	390 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	NUP62CL	Q9H1M0	184 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	ADAM7	Q9H2U9	754 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	POLI	Q9UNA4	740 aa		19.98	■□□□□ 0.79
C4A-256	ENST00000490663	HELZ	P42694	1942 aa	Known RBP	19.98	■□□□□ 0.79
C4A-256	ENST00000490663	ZMYND10	O75800	440 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	OAZ2	O95190	189 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	VNN1	O95497	513 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	CYP11A1	P05108	521 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	ACAT1	P24752	427 aa	Known RBP	19.97	■□□□□ 0.79
C4A-256	ENST00000490663	RPL13	P26373	211 aa	Known RBP	19.97	■□□□□ 0.79
C4A-256	ENST00000490663	PNPLA4	P41247	253 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	VAMP7	P51809	220 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	ZP2	Q05996	745 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	STIM1	Q13586	685 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	MYBPC2	Q14324	1141 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	PPM1L	Q5SGD2	360 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	PDCL2	Q8N4E4	241 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	TTC9B	Q8N6N2	239 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	SMG7	Q92540	1137 aa	Known RBP	19.97	■□□□□ 0.79
C4A-256	ENST00000490663	RPGRIP1	Q96KN7	1286 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	CRISPLD1	Q9H336	500 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	FAM50B	Q9Y247	325 aa		19.97	■□□□□ 0.79
C4A-256	ENST00000490663	R3HCC1	Q9Y3T6	440 aa	Known RBP	19.97	■□□□□ 0.79
C4A-256	ENST00000490663	TRIO	O75962	3097 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	PSMA7	O14818	248 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	SSTR3	P32745	418 aa	Predicted RBP	19.96	■□□□□ 0.79
C4A-256	ENST00000490663	PSMC2	P35998	433 aa	Known RBP	19.96	■□□□□ 0.79
C4A-256	ENST00000490663	GCLM	P48507	274 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	NTHL1	P78549	312 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	ITIH3	Q06033	890 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	PPP3CA	Q08209	521 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	ADCY1	Q08828	1119 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	SCARA5	Q6ZMJ2	495 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	GPR149	Q86SP6	731 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	METTL23	Q86XA0	190 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	TMC2	Q8TDI7	906 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	TMEM174	Q8WUU8	243 aa		19.96	■□□□□ 0.79
C4A-256	ENST00000490663	DUSP9	Q99956	384 aa	Known RBP	19.96	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms