RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 NECTIN4Q96NY8 510 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 ACAP3Q96P50 834 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 USP28Q96RU2 1077 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 FIZ1Q96SL8 496 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 TTPALQ9BTX7 342 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 RPP25Q9BUL9 199 aaKnown RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 SFXN1Q9H9B4 322 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 FBXO2Q9UK22 296 aaPredicted RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 NR2E1Q9Y466 385 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
PRPF4B-208ENST00000490653 FRYLO94915 3013 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 PHLPP2Q6ZVD8 1323 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 NOTCH4Q99466 2003 aa8□□□□□ -1.13
PRPF4B-208ENST00000490653 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CARNS1A5YM72 827 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 MYMKA6NI61 221 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 LACTBL1A8MY62 500 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 PPEF2O14830 753 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CCL16O15467 120 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 MCF2P10911 925 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 OR1D2P34982 312 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 DDIT3P35638 169 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 LONP1P36776 959 aaKnown RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 RNF144AP50876 292 aaPredicted RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CDR1P51861 262 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 RAB15P59190 212 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 DYMQ7RTS9 669 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 GRASPQ7Z6J2 395 aaPredicted RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 MYCT1Q8N699 235 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 TDRD5Q8NAT2 981 aaKnown RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 ZSWIM2Q8NEG5 633 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CMASQ8NFW8 434 aaPredicted RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CALML4Q96GE6 196 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 DRC1Q96MC2 740 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CCDC94Q9BW85 323 aaPredicted RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CCSER1Q9C0I3 900 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 ZHX3Q9H4I2 956 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 C17orf75Q9HAS0 396 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 WDR6Q9NNW5 1121 aaKnown RBP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 HCFC1R1Q9NWW0 138 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 ANKFY1Q9P2R3 1169 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 TUBGCP4Q9UGJ1 667 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 SSX2IPQ9Y2D8 614 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 DOCK8Q8NF50 2099 aa7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 SF3B1O75533 1304 aaKnown RBP eCLIP7.99□□□□□ -1.13
PRPF4B-208ENST00000490653 CITO14578 2027 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 DENND4AQ7Z401 1863 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FAM186AA6NE01 2351 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 MED19A0JLT2 244 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TMEM189-UBE2V1I3L0A0 370 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 PODXLO00592 558 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 CLDN3O15551 220 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TRAK2O60296 914 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FAM189A1O60320 539 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TBC1D4O60343 1298 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FAM13AO94988 1023 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 SEC24AO95486 1093 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 CXCL8P10145 99 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 KCNE1P15382 129 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 MATR3P43243 847 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ZNF131P52739 623 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 SMTNP53814 917 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 YARSP54577 528 aaKnown RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ARPP19P56211 112 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 MCL1Q07820 350 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 KCNA1Q09470 495 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 RAB33AQ14088 237 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ZBTB6Q15916 424 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FOXD4L6Q3SYB3 417 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FOXD4L3Q6VB84 417 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 C15orf39Q6ZRI6 1047 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 CCDC149Q6ZUS6 474 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ITFG1Q8TB96 612 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 EPS8L1Q8TE68 723 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 STAMQ92783 540 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 CHAMP1Q96JM3 812 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 AK8Q96MA6 479 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 PRRX2Q99811 253 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TIPINQ9BVW5 301 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FGFBP2Q9BYJ0 223 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 PLEKHA4Q9H4M7 779 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 KCNK12Q9HB15 430 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 PIDD1Q9HB75 910 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 ENAMQ9NRM1 1142 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TBC1D7Q9P0N9 293 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 DNMT3BQ9UBC3 853 aaKnown RBP7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 STK39Q9UEW8 545 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 FBXW11Q9UKB1 542 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 TBX20Q9UMR3 447 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 SORCS3Q9UPU3 1222 aa7.98□□□□□ -1.13
PRPF4B-208ENST00000490653 USTQ9Y2C2 406 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms