RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FAM170BA6NMN3 283 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 SPTLC1O15269 473 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 POLR2DO15514 142 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 KINO60870 393 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 ADRB2P07550 413 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 SP9P0CG40 484 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ODC1P11926 461 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 EPHB3P54753 998 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 EPHA5P54756 1037 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 MLLT6P55198 1093 aaPredicted RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 UBXN2BQ14CS0 331 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 POSTNQ15063 836 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 E2F4Q16254 413 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 PRSS36Q5K4E3 855 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 DHX58Q96C10 678 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 HVCN1Q96D96 273 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 DNAJC19Q96DA6 116 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 KXD1Q9BQD3 176 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 MSTO1Q9BUK6 570 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 RPP25Q9BUL9 199 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 TRMT61BQ9BVS5 477 aaKnown RBP11.23□□□□□ -0.61
TTC28-207ENST00000490475 ST6GALNAC4Q9H4F1 302 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 BRD9Q9H8M2 597 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 TRPV4Q9HBA0 871 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 LTB4R2Q9NPC1 389 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 SEL1LQ9UBV2 794 aa11.23□□□□□ -0.61
TTC28-207ENST00000490475 VPS13AQ96RL7 3174 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 A0A0B4J269 797 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 A0A1B0GVL5 298 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 PSMC3P17980 439 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 CMA1P23946 247 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
TTC28-207ENST00000490475 GTF2BQ00403 316 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 TWF1Q12792 350 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 GPR17Q13304 367 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 SLC5A9Q2M3M2 681 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 ADALQ6DHV7 355 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 TPRG1Q6ZUI0 275 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 MAP4K3Q8IVH8 894 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 IQUBQ8NA54 791 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 ASB16Q96NS5 453 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
TTC28-207ENST00000490475 SPATA6Q9NWH7 488 aaPredicted RBP11.22□□□□□ -0.61
TTC28-207ENST00000490475 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 TUBGCP4Q9UGJ1 667 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 EXOC7Q9UPT5 735 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 C2CD2Q9Y426 696 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 PCDHGA2Q9Y5H1 932 aa11.22□□□□□ -0.61
TTC28-207ENST00000490475 ZNF292O60281 2723 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 SEC24AO95486 1093 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 CEBPBP17676 345 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 TUFMP49411 452 aaKnown RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 NRLP54845 237 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 LILRA4P59901 499 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 ALCAMQ13740 583 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 TMEM132DQ14C87 1099 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 VEPH1Q14D04 833 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 ARHGAP15Q53QZ3 475 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 METTL23Q86XA0 190 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 THEM5Q8N1Q8 247 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 C2orf15Q8WU43 125 aaKnown RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 RUBCNQ92622 972 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 FIZ1Q96SL8 496 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 TBC1D7Q9P0N9 293 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
TTC28-207ENST00000490475 YIPF1Q9Y548 306 aa11.21□□□□□ -0.61
TTC28-207ENST00000490475 OTOGLQ3ZCN5 2332 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 ZNF263O14978 683 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 FAM189A1O60320 539 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 IL18RAPO95256 599 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
TTC28-207ENST00000490475 CYP11A1P05108 521 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 MYL4P12829 197 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 IDEP14735 1019 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 PFKFB1P16118 471 aa11.2□□□□□ -0.62
TTC28-207ENST00000490475 GAP43P17677 238 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms