RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 KIF13BQ9NQT8 1826 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 GLTPD2A6NH11 291 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 STX6O43752 255 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 JAK2O60674 1132 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 TTLL1O95922 423 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 FDPSP14324 419 aaKnown RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 KIF5BP33176 963 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 GNAQP50148 359 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 GPR85P60893 370 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 HSP90AA2PQ14568 343 aaPredicted RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 ABCB5Q2M3G0 1257 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 CLEC17AQ6ZS10 378 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 USP50Q70EL3 339 aaPredicted RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 APOBEC3FQ8IUX4 373 aaKnown RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 FAM184AQ8NB25 1140 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 CTCFLQ8NI51 663 aaPredicted RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 NUP133Q8WUM0 1156 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 CACTINQ8WUQ7 758 aaKnown RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 TNPO1Q92973 898 aaKnown RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 HOOK2Q96ED9 719 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 CEP95Q96GE4 821 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 LZTS2Q9BRK4 669 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 MYL10Q9BUA6 226 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 ZNF408Q9H9D4 720 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.19□□□□□ -1.58
RBM39-235ENST00000490354 CABP5Q9NP86 173 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 NYAP2Q9P242 653 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 ORC3Q9UBD5 711 aaPredicted RBP5.19□□□□□ -1.58
RBM39-235ENST00000490354 SYNPO2Q9UMS6 1093 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 STX8Q9UNK0 236 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 MTMR6Q9Y217 621 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 PPP2R3BQ9Y5P8 575 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 TAF1P21675 1872 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 STK36Q9NRP7 1315 aa5.19□□□□□ -1.58
RBM39-235ENST00000490354 KIAA1551Q9HCM1 1747 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 A0A087X1B8 175 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 BLACEA4D250 179 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 IQCA1LA6NCM1 817 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 FAM47E-STBD1D6RA91 191 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 MPHOSPH10O00566 681 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 PRODHO43272 600 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 PRPF3O43395 683 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 CTNND1O60716 968 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 GH2P01242 217 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 SNHG28P0DPA3 235 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 RXRAP19793 462 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 ACRV1P26436 265 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 GUCY1A2P33402 732 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 ETV4P43268 484 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 SSRP1Q08945 709 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 PKP1Q13835 747 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 RRP1BQ14684 758 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 GRM4Q14833 912 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 WDR72Q3MJ13 1102 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 SUPT20HL1Q3ZLR7 823 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 BTBD8Q5XKL5 378 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 TMTC3Q6ZXV5 915 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 MIGA2Q7L4E1 593 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 ZNF575Q86XF7 245 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 RAB11FIP4Q86YS3 637 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 FBXO18Q8NFZ0 1043 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.18□□□□□ -1.589e-65■■■■■ 26.8
RBM39-235ENST00000490354 WASF1Q92558 559 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 SCYL1Q96KG9 808 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.18□□□□□ -1.584e-23■■□□□ 13.8
RBM39-235ENST00000490354 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 RNF26Q9BY78 433 aaPredicted RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 ST7Q9NRC1 585 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 CLIP2Q9UDT6 1046 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 ATP6V1DQ9Y5K8 247 aa5.18□□□□□ -1.58
RBM39-235ENST00000490354 ASTN2O75129 1339 aaPredicted RBP5.18□□□□□ -1.58
RBM39-235ENST00000490354 FAM90A27PA6NNH2 459 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 H3BQV1 296 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 DEXIO95424 95 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 ASNSP08243 561 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 PARP1P09874 1014 aaKnown RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 PDHBP11177 359 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 EEF2P13639 858 aaKnown RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 EPHX2P34913 555 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 INHBCP55103 352 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 AKAP17AQ02040 695 aaKnown RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 ICA1Q05084 483 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 FOXL1Q12952 345 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 NFYCQ13952 458 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 SEPT2Q15019 361 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 FNDC7Q5VTL7 733 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 LARP4Q71RC2 724 aaKnown RBP eCLIP5.17□□□□□ -1.58
RBM39-235ENST00000490354 PNMA8AQ86V59 439 aaPredicted RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 FAM177A1Q8N128 213 aaPredicted RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 SRBD1Q8N5C6 995 aaKnown RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 CELF2-AS1Q8N7Q2 184 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 GMCL1P1Q8NEA9 526 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 CFHR4Q92496 578 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 PHKBQ93100 1093 aa5.17□□□□□ -1.58
RBM39-235ENST00000490354 DCPSQ96C86 337 aaKnown RBP5.17□□□□□ -1.58
RBM39-235ENST00000490354 GBP4Q96PP9 640 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms