RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 LEO1Q8WVC0 666 aaPredicted RBP18.84■□□□□ 0.61
SEC13-218ENST00000490283 ANKRD36BP1Q96IX9 119 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
SEC13-218ENST00000490283 USP25Q9UHP3 1055 aa18.84■□□□□ 0.61
SEC13-218ENST00000490283 KPNA7A9QM74 516 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 PDGFBP01127 241 aaPredicted RBP18.83■□□□□ 0.6
SEC13-218ENST00000490283 ITGB3P05106 788 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 CYP11A1P05108 521 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 CFHP08603 1231 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 OR4Q2P0C623 313 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 SLFN14P0C7P3 912 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 CMA1P23946 247 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 AVPR2P30518 371 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 ALDH1A3P47895 512 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 SNRPFP62306 86 aaKnown RBP18.83■□□□□ 0.6
SEC13-218ENST00000490283 LEMD2Q8NC56 503 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 GLIS3Q8NEA6 775 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 ZNF507Q8TCN5 953 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 ING5Q8WYH8 240 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 PGLYRP2Q96PD5 576 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 SCAND2PQ9GZW5 306 aaPredicted RBP18.83■□□□□ 0.6
SEC13-218ENST00000490283 ASAH2Q9NR71 780 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 GDE1Q9NZC3 331 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 SERTAD1Q9UHV2 236 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 YIPF1Q9Y548 306 aa18.83■□□□□ 0.6
SEC13-218ENST00000490283 NARSO43776 548 aaKnown RBP18.82■□□□□ 0.6
SEC13-218ENST00000490283 TNNC2P02585 160 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 KRT19P08727 400 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 PFKFB1P16118 471 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
SEC13-218ENST00000490283 EPHB3P54753 998 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 EPM2AIP1Q7L775 607 aaPredicted RBP18.82■□□□□ 0.6
SEC13-218ENST00000490283 NPAS3Q8IXF0 933 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 NELFCDQ8IXH7 590 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 SIX5Q8N196 739 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 CSGALNACT2Q8N6G5 542 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 LRRC52Q8N7C0 313 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 ZSWIM2Q8NEG5 633 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 FLCNQ8NFG4 579 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 PDE11AQ9HCR9 933 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 EXOC1Q9NV70 894 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 CGNQ9P2M7 1197 aaKnown RBP18.82■□□□□ 0.6
SEC13-218ENST00000490283 WNT16Q9UBV4 365 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 AGAP1Q9UPQ3 857 aa18.82■□□□□ 0.6
SEC13-218ENST00000490283 A0A1B0GVL5 298 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 STK25O00506 426 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 CASP1P29466 404 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 NUBP1P53384 320 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 PTPN5P54829 565 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 VCPP55072 806 aaKnown RBP18.81■□□□□ 0.6
SEC13-218ENST00000490283 RBP5P82980 135 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 SMARCB1Q12824 385 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 BFSP1Q12934 665 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 DUSP4Q13115 394 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 CUL4BQ13620 913 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 ASTLQ6HA08 431 aaPredicted RBP18.81■□□□□ 0.6
SEC13-218ENST00000490283 PARM1Q6UWI2 310 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 C1orf127Q8N9H9 656 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 MCRS1Q96EZ8 462 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 SLC39A2Q9NP94 309 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
SEC13-218ENST00000490283 MYO10Q9HD67 2058 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 MTMR11A4FU01 709 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 HUS1O60921 280 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 MICAL2O94851 1124 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 MYL1P05976 194 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 CLCN5P51795 746 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 MYO1EQ12965 1108 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 SLC5A9Q2M3M2 681 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 SLC39A12Q504Y0 691 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 WSCD1Q658N2 575 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 GRAMD1CQ8IYS0 662 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 DCP1BQ8IZD4 617 aaKnown RBP18.8■□□□□ 0.6
SEC13-218ENST00000490283 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
SEC13-218ENST00000490283 GOLGA5Q8TBA6 731 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 SCFD1Q8WVM8 642 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 FGF14Q92915 247 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 CCDC47Q96A33 483 aaKnown RBP18.8■□□□□ 0.6
SEC13-218ENST00000490283 FNBP1Q96RU3 617 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 MTMR12Q9C0I1 747 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 IRF2BPLQ9H1B7 796 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 HSFX1Q9UBD0 423 aa18.8■□□□□ 0.6
SEC13-218ENST00000490283 ACTN4O43707 911 aaKnown RBP18.79■□□□□ 0.6
SEC13-218ENST00000490283 MYL4P12829 197 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 CEBPBP17676 345 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 HOXD13P35453 343 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 SYKP43405 635 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 TUFMP49411 452 aaKnown RBP18.79■□□□□ 0.6
SEC13-218ENST00000490283 CYP2J2P51589 502 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 WNT7BP56706 349 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 TSPY1Q01534 308 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 EHHADHQ08426 723 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 PSMD2Q13200 908 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 VEPH1Q14D04 833 aa18.79■□□□□ 0.6
SEC13-218ENST00000490283 SNRNP35Q16560 246 aaKnown RBP18.79■□□□□ 0.6
SEC13-218ENST00000490283 DUOXA2Q1HG44 320 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms