RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LIMK1P53667 647 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 ANAPC15P60006 121 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 SPAG1Q07617 926 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 CCINQ13939 588 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 NOLC1Q14978 699 aaKnown RBP eCLIP15.22■□□□□ 0.03
VARS-227ENST00000489979 CCDC6Q16204 474 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 TTC38Q5R3I4 469 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
VARS-227ENST00000489979 GAREM2Q75VX8 874 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 SNX29Q8TEQ0 813 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 DRC1Q96MC2 740 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 ATXN3LQ9H3M9 355 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 SLC27A5Q9Y2P5 690 aa15.22■□□□□ 0.03
VARS-227ENST00000489979 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 CXCL8P10145 99 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 ST3GAL1Q11201 340 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 MAPK7Q13164 816 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 GPR17Q13304 367 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 GPR158Q5T848 1215 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 HAUS6Q7Z4H7 955 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 DNAJB7Q7Z6W7 309 aaPredicted RBP15.21■□□□□ 0.03
VARS-227ENST00000489979 USP37Q86T82 979 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 SYNPOQ8N3V7 929 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 C4orf32Q8N8J7 132 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 C12orf50Q8NA57 414 aaPredicted RBP15.21■□□□□ 0.03
VARS-227ENST00000489979 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
VARS-227ENST00000489979 RXFP3Q9NSD7 469 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 DNM3Q9UQ16 869 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 MYH11P35749 1972 aa15.21■□□□□ 0.03
VARS-227ENST00000489979 MTMR11A4FU01 709 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 OR6C75A6NL08 312 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 TM4SF5O14894 197 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 EXTL3O43909 919 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 TOM1L1O75674 476 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 SOAT2O75908 522 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 ZNF806P0C7X5 589 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 GABRR2P28476 465 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 LRPAP1P30533 357 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 PXNP49023 591 aaPredicted RBP15.2■□□□□ 0.02
VARS-227ENST00000489979 TNK2Q07912 1038 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 STRN3Q13033 797 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 NBR1Q14596 966 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 CENPPQ6IPU0 288 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 RINT1Q6NUQ1 792 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 DSTYKQ6XUX3 929 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 C1orf186Q6ZWK4 172 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 ATAD1Q8NBU5 361 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 GAB3Q8WWW8 586 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 PSMG2Q969U7 264 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 C8orf76Q96K31 380 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
VARS-227ENST00000489979 OBP2AQ9NY56 170 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 ASB3Q9Y575 518 aa15.2■□□□□ 0.02
VARS-227ENST00000489979 RPP40O75818 363 aaKnown RBP15.19■□□□□ 0.02
VARS-227ENST00000489979 EPN2O95208 641 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 AARSP49588 968 aaKnown RBP eCLIP15.19■□□□□ 0.023e-8■■■■■ 29.1
VARS-227ENST00000489979 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
VARS-227ENST00000489979 PDIA5Q14554 519 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 ARHGAP15Q53QZ3 475 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 CACNA2D4Q7Z3S7 1137 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 KBTBD6Q86V97 674 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 TTC9BQ8N6N2 239 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 BPIFB1Q8TDL5 484 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
VARS-227ENST00000489979 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 PLEKHA5Q9HAU0 1116 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 RALYQ9UKM9 306 aaKnown RBP15.19■□□□□ 0.02
VARS-227ENST00000489979 STK24Q9Y6E0 443 aa15.19■□□□□ 0.02
VARS-227ENST00000489979 ANK1P16157 1881 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 EML5Q05BV3 1969 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 PP2D1A8MPX8 630 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 CLDN3O15551 220 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 FGF19O95750 216 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 CYP3A5P20815 502 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
VARS-227ENST00000489979 RAP1GAPP47736 663 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 SHC2P98077 582 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 CYP4F8P98187 520 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 MCL1Q07820 350 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 RAD51AP2Q09MP3 1159 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 ZBTB6Q15916 424 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 ITPRIPL2Q3MIP1 535 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 STPG1Q5TH74 334 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 KRT79Q5XKE5 535 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 OVOS1Q6IE37 1185 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
VARS-227ENST00000489979 TMEM161BQ8NDZ6 487 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms