RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 ARID3AQ99856 593 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 COLEC11Q9BWP8 271 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 NLRC4Q9NPP4 1024 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 ABHD10Q9NUJ1 306 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 CACNG4Q9UBN1 327 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 NXF1Q9UBU9 619 aaKnown RBP14.31□□□□□ -0.12
TRAIP-210ENST00000489948 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 POLIQ9UNA4 740 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 MRPL42Q9Y6G3 142 aaKnown RBP14.31□□□□□ -0.12
TRAIP-210ENST00000489948 CHD7Q9P2D1 2997 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 LRRC53A6NM62 1247 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 H0YGN5 161 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 RNF225M0QZC1 329 aaPredicted RBP14.3□□□□□ -0.12
TRAIP-210ENST00000489948 TRAPPC3O43617 180 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 EFEMP2O95967 443 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 ALDH2P05091 517 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 LINC00271P0C7V0 271 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 ODC1P11926 461 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 TYMPP19971 482 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 SOX5P35711 763 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 PPM1AP35813 382 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 STAT1P42224 750 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 ZNF132P52740 706 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 BCAR1P56945 870 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 ELAVL2Q12926 359 aaKnown RBP14.3□□□□□ -0.12
TRAIP-210ENST00000489948 DRAP1Q14919 205 aaPredicted RBP14.3□□□□□ -0.12
TRAIP-210ENST00000489948 MEA1Q16626 185 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 FAM71AQ8IYT1 594 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 OR8K1Q8NGG5 319 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 KAT5Q92993 513 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 SENP8Q96LD8 212 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 ZNF558Q96NG5 402 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 CISHQ9NSE2 258 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 AIPL1Q9NZN9 384 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 HCSTQ9UBK5 93 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 STK39Q9UEW8 545 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 DSEQ9UL01 958 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 FAN1Q9Y2M0 1017 aa14.3□□□□□ -0.12
TRAIP-210ENST00000489948 SF3B1O75533 1304 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAIP-210ENST00000489948 SYN3O14994 580 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 TLL1O43897 1013 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 HUS1O60921 280 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 CILPO75339 1184 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 CLSTN1O94985 981 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 ITGB1P05556 798 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 FERP16591 822 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 WARSP23381 471 aaKnown RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 PRKCIP41743 596 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 ALDH7A1P49419 539 aaKnown RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 CDK17Q00537 523 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 SHHQ15465 462 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 SOWAHAQ2M3V2 549 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 TIGD5Q53EQ6 642 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 FAM117BQ6P1L5 589 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 KCNT2Q6UVM3 1135 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 SCARA5Q6ZMJ2 495 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 UNC93AQ86WB7 457 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 RNF168Q8IYW5 571 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 SLC39A11Q8N1S5 342 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 KBTBD7Q8WVZ9 684 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 ELMO3Q96BJ8 720 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 SDCBP2Q9H190 292 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 AAASQ9NRG9 546 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 BARX2Q9UMQ3 279 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 PRG3Q9Y2Y8 225 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-210ENST00000489948 RWDD3Q9Y3V2 267 aa14.29□□□□□ -0.12
TRAIP-210ENST00000489948 CYB561D2O14569 222 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 GABRDO14764 452 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 CCDC172P0C7W6 258 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 ARHGAP44Q17R89 818 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 SFMBT2Q5VUG0 894 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 E4F1Q66K89 784 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-210ENST00000489948 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 CPLX3Q8WVH0 158 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 IGSF21Q96ID5 467 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 MMS19Q96T76 1030 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 PCDHA11Q9Y5I1 949 aa14.28□□□□□ -0.12
TRAIP-210ENST00000489948 TRANK1O15050 2925 aa14.27□□□□□ -0.12
TRAIP-210ENST00000489948 F8W810 466 aa14.27□□□□□ -0.13
TRAIP-210ENST00000489948 FOXN3O00409 490 aaPredicted RBP14.27□□□□□ -0.13
TRAIP-210ENST00000489948 PAEPP09466 180 aa14.27□□□□□ -0.13
TRAIP-210ENST00000489948 WEE2P0C1S8 567 aa14.27□□□□□ -0.13
TRAIP-210ENST00000489948 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.13
TRAIP-210ENST00000489948 ANXA13P27216 316 aa14.27□□□□□ -0.13
TRAIP-210ENST00000489948 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
TRAIP-210ENST00000489948 LHX1P48742 406 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms