RNA–Protein interactions for RNA: ENST00000489770.1

SETD3-208, Transcript of SET domain containing 3, humanhuman

TSL 5

Gene SETD3, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD3-208ENST00000489770 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
SETD3-208ENST00000489770 RPP25Q9BUL9 199 aaKnown RBP11.02□□□□□ -0.65
SETD3-208ENST00000489770 CELF4Q9BZC1 486 aaKnown RBP11.02□□□□□ -0.65
SETD3-208ENST00000489770 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
SETD3-208ENST00000489770 SLC5A6Q9Y289 635 aa11.02□□□□□ -0.65
SETD3-208ENST00000489770 NUMBLQ9Y6R0 609 aa11.02□□□□□ -0.65
SETD3-208ENST00000489770 GPAA1O43292 621 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 RECKO95980 971 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
SETD3-208ENST00000489770 CA8P35219 290 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 HSD17B4P51659 736 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 CLCN4P51793 760 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 FANCCQ00597 558 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 MTAPQ13126 283 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
SETD3-208ENST00000489770 NEDD9Q14511 834 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 PGM5Q15124 567 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 AASDHQ4L235 1098 aaPredicted RBP11.01□□□□□ -0.65
SETD3-208ENST00000489770 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 CLASRPQ8N2M8 674 aaKnown RBP11.01□□□□□ -0.65
SETD3-208ENST00000489770 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 MISP3Q96FF7 219 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 KLHL5Q96PQ7 755 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
SETD3-208ENST00000489770 CLUHO75153 1309 aa11.01□□□□□ -0.65
SETD3-208ENST00000489770 M0QZ92 97 aa11□□□□□ -0.65
SETD3-208ENST00000489770 GREM1O60565 184 aa11□□□□□ -0.65
SETD3-208ENST00000489770 PAPLNO95428 1278 aa11□□□□□ -0.65
SETD3-208ENST00000489770 APPP05067 770 aa11□□□□□ -0.65
SETD3-208ENST00000489770 IFIT2P09913 472 aaKnown RBP11□□□□□ -0.65
SETD3-208ENST00000489770 CD72P21854 359 aa11□□□□□ -0.65
SETD3-208ENST00000489770 VAMP1P23763 118 aa11□□□□□ -0.65
SETD3-208ENST00000489770 POLGP54098 1239 aaPredicted RBP11□□□□□ -0.65
SETD3-208ENST00000489770 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
SETD3-208ENST00000489770 BNIP3Q12983 259 aa11□□□□□ -0.65
SETD3-208ENST00000489770 TP53INP2Q8IXH6 220 aa11□□□□□ -0.65
SETD3-208ENST00000489770 FAM13CQ8NE31 585 aa11□□□□□ -0.65
SETD3-208ENST00000489770 APPBP2Q92624 585 aa11□□□□□ -0.65
SETD3-208ENST00000489770 NELL2Q99435 816 aa11□□□□□ -0.65
SETD3-208ENST00000489770 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
SETD3-208ENST00000489770 METTL5Q9NRN9 209 aaKnown RBP11□□□□□ -0.65
SETD3-208ENST00000489770 REV1Q9UBZ9 1251 aa11□□□□□ -0.65
SETD3-208ENST00000489770 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
SETD3-208ENST00000489770 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
SETD3-208ENST00000489770 DENND3A2RUS2 1198 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 UPK3BL1B0FP48 263 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 UPK3BL2E5RIL1 263 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 NCAM2O15394 837 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 HTR3BO95264 441 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 SF3A2Q15428 464 aaKnown RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 CDC37Q16543 378 aaPredicted RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 TMEM201Q5SNT2 666 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 SFRP5Q5T4F7 317 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 ZNF574Q6ZN55 896 aaPredicted RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 CDH24Q86UP0 819 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 TMEM173Q86WV6 379 aaPredicted RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 TMEM57Q8N5G2 664 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 ST13P5Q8NFI4 369 aaPredicted RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 HRASLS5Q96KN8 279 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 LRRC3Q9BY71 257 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 UBA5Q9GZZ9 404 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 CPVLQ9H3G5 476 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.99□□□□□ -0.65
SETD3-208ENST00000489770 NOC2LQ9Y3T9 749 aaKnown RBP10.99□□□□□ -0.65
SETD3-208ENST00000489770 ITPR1Q14643 2758 aa10.99□□□□□ -0.65
SETD3-208ENST00000489770 CCDC195A0A1B0GUA6 201 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 SHISA7A6NL88 538 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 NT5C1B-RDH14C9J2C7 533 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 CFBP00751 764 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 CAPNS1P04632 268 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 ZNF806P0C7X5 589 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 CCND2P30279 289 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 METAP2P50579 478 aaKnown RBP eCLIP10.98□□□□□ -0.65
SETD3-208ENST00000489770 NOVA1P51513 510 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 YARSP54577 528 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 BCAR1P56945 870 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 ZNF746Q6NUN9 644 aaPredicted RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 CEP85Q6P2H3 762 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 C19orf48Q6RUI8 117 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 DDX53Q86TM3 631 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 SPACA3Q8IXA5 215 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 ABI1Q8IZP0 508 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 TMEM40Q8WWA1 233 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 MRRFQ96E11 262 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 TMEM169Q96HH4 297 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 INPP4AQ96PE3 977 aaPredicted RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 TNKS2Q9H2K2 1166 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 MAP3K20Q9NYL2 800 aaKnown RBP10.98□□□□□ -0.65
SETD3-208ENST00000489770 UBP1Q9NZI7 540 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 VAV3Q9UKW4 847 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 ST3GAL5Q9UNP4 418 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 PCDHA2Q9Y5H9 948 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 CELSR3Q9NYQ7 3312 aa10.98□□□□□ -0.65
SETD3-208ENST00000489770 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
SETD3-208ENST00000489770 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
SETD3-208ENST00000489770 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
SETD3-208ENST00000489770 FGRP09769 529 aa10.97□□□□□ -0.65
SETD3-208ENST00000489770 MARK3P27448 753 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms