RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZNF263O14978 683 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 PALMO75781 387 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ARIH2O95376 493 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MOCS3O95396 460 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 STAU1O95793 577 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SNAI1O95863 264 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GNRH1P01148 92 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 HLA-DRAP01903 254 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 C4BPAP04003 597 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ATP1A1P05023 1023 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 CALB1P05937 261 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ADRB2P07550 413 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MMP3P08254 477 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 FAM163BP0C2L3 166 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 AKR1A1P14550 325 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 CYP11B1P15538 503 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 PROZP22891 400 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 KLRC1P26715 233 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 HOXD10P28358 340 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MAN1A1P33908 653 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GMPRP36959 345 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 NSFP46459 744 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 YARSP54577 528 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GALCP54803 685 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 FCGRTP55899 365 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 DHX9Q08211 1270 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MYO1EQ12965 1108 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 CUL2Q13617 745 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 NCOA4Q13772 614 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF568Q3ZCX4 644 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SLC39A4Q6P5W5 647 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MTHFD1LQ6UB35 978 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 HDXQ7Z353 690 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MAATS1Q7Z4T9 603 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SLFN11Q7Z7L1 901 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 DAAM2Q86T65 1068 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GLYCTKQ8IVS8 523 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ZSCAN1Q8NBB4 408 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 TPCN2Q8NHX9 752 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ACTRT1Q8TDG2 376 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 AFG1LQ8WV93 481 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SH2D3AQ9BRG2 576 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 C16orf70Q9BSU1 422 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SYT11Q9BT88 431 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC94Q9BW85 323 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 KDM4CQ9H3R0 1056 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 HOMER3Q9NSC5 361 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 SEPT11Q9NVA2 429 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 OGFRQ9NZT2 677 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 CTTNBP2NLQ9P2B4 639 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ANKFY1Q9P2R3 1169 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 RAB21Q9UL25 225 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 NENFQ9UMX5 172 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 AKT3Q9Y243 479 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 TRIOBPQ9H2D6 2365 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 DNAH12Q6ZR08 3092 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 KIAA1217Q5T5P2 1943 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 ADGRA3Q8IWK6 1321 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 MYH9P35579 1960 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 TMCO5BA8MYB1 307 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ZBTB42B2RXF5 422 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 H0YGN5 161 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 TNPO2O14787 897 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 THAP12O43422 761 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 DUSP11O75319 330 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 F2P00734 622 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ASS1P00966 412 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 FTLP02792 175 aaPredicted RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 PAEPP09466 180 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 KRT5P13647 590 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 EIF4BP23588 611 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 MARK3P27448 753 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 RDXP35241 583 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 PNPLA4P41247 253 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 NOP14P78316 857 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 DLG4P78352 724 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 RBP5P82980 135 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 GRIK4Q16099 956 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ENOX2Q16206 610 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 HSP90B2PQ58FF3 399 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF667Q5HYK9 610 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 C1orf220Q5T0J3 134 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ACAD10Q6JQN1 1059 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 C8orf74Q6P047 294 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 NOTUMQ6P988 496 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 CREG2Q8IUH2 290 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 IFT20Q8IY31 132 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 EFCAB13Q8IY85 973 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 RPUSD2Q8IZ73 545 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 KRT222Q8N1A0 295 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 LINC01465Q8N7H1 131 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM35BQ8NCS4 154 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 TAS1R2Q8TE23 839 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 EPS8L1Q8TE68 723 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 NLRP4Q96MN2 994 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms