RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ELMOD1Q8N336 334 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 TMEM130Q8N3G9 435 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 C1orf127Q8N9H9 656 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 LEMD2Q8NC56 503 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 ZSWIM2Q8NEG5 633 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 SPATA18Q8TC71 538 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 BORCS6Q96GS4 357 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 CCDC34Q96HJ3 373 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 DNMT3BQ9UBC3 853 aaKnown RBP20.51■□□□□ 0.87
MRPL55-230ENST00000489430 DUSP12Q9UNI6 340 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 TECTAO75443 2155 aa20.51■□□□□ 0.87
MRPL55-230ENST00000489430 GOLGA8IPA6NC78 632 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 GOLGA8JA6NMD2 632 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 CYB561D2O14569 222 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
MRPL55-230ENST00000489430 SEC24AO95486 1093 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 CASP1P29466 404 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 NDUFA8P51970 172 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 RBP5P82980 135 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 PLD1Q13393 1074 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 RNF19BQ6ZMZ0 732 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 FBXL6Q8N531 539 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 XXYLT1Q8NBI6 393 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 FGF13Q92913 245 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 PDE11AQ9HCR9 933 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 SLC39A2Q9NP94 309 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 EXOC1Q9NV70 894 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 INTS13Q9NVM9 706 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 GDE1Q9NZC3 331 aa20.5■□□□□ 0.87
MRPL55-230ENST00000489430 C2orf16Q68DN1 1984 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 ZNF197O14709 1029 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 ITGB3P05106 788 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 RHOP08100 348 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 TMEM191BP0C7N4 346 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 WNT7BP56706 349 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 SNRNP35Q16560 246 aaKnown RBP20.49■□□□□ 0.87
MRPL55-230ENST00000489430 DUOXA2Q1HG44 320 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 IQCEQ6IPM2 695 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 MTSS1LQ765P7 747 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 CBWD2Q8IUF1 395 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 WDR49Q8IV35 697 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 SUGP1Q8IWZ8 645 aaKnown RBP20.49■□□□□ 0.87
MRPL55-230ENST00000489430 CXorf38Q8TB03 319 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 C2orf15Q8WU43 125 aaKnown RBP20.49■□□□□ 0.87
MRPL55-230ENST00000489430 CCDC47Q96A33 483 aaKnown RBP20.49■□□□□ 0.87
MRPL55-230ENST00000489430 ANKRD36BP1Q96IX9 119 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 GDAP2Q9NXN4 497 aa20.49■□□□□ 0.87
MRPL55-230ENST00000489430 R3HCC1Q9Y3T6 440 aaKnown RBP20.49■□□□□ 0.87
MRPL55-230ENST00000489430 KIF20AO95235 890 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
MRPL55-230ENST00000489430 NUBP1P53384 320 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 NTHL1P78549 312 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 HTR4Q13639 388 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 KMT5BQ4FZB7 885 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 NELFCDQ8IXH7 590 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 TMEM86AQ8N2M4 240 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 SLC44A3Q8N4M1 653 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 CSGALNACT2Q8N6G5 542 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 ZNF512Q96ME7 567 aaPredicted RBP20.48■□□□□ 0.87
MRPL55-230ENST00000489430 PRRX2Q99811 253 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 HCFC1R1Q9NWW0 138 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 AGAP1Q9UPQ3 857 aa20.48■□□□□ 0.87
MRPL55-230ENST00000489430 MRPS23Q9Y3D9 190 aaKnown RBP20.48■□□□□ 0.87
MRPL55-230ENST00000489430 TNNC2P02585 160 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 EPHA5P54756 1037 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 MYO1EQ12965 1108 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 STK4Q13043 487 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 PSMD6Q15008 389 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 CENPPQ6IPU0 288 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 DPH6Q7L8W6 267 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 SLC9A9Q8IVB4 645 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 ITFG1Q8TB96 612 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 NOC3LQ8WTT2 800 aaKnown RBP20.47■□□□□ 0.87
MRPL55-230ENST00000489430 CHAMP1Q96JM3 812 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 MTMR12Q9C0I1 747 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 ZCWPW1Q9H0M4 648 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 WNT16Q9UBV4 365 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 ASB3Q9Y575 518 aa20.47■□□□□ 0.87
MRPL55-230ENST00000489430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
MRPL55-230ENST00000489430 HUS1O60921 280 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 VNN2O95498 520 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 SRFP11831 508 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 ALDH1A3P47895 512 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 TUFMP49411 452 aaKnown RBP20.46■□□□□ 0.87
MRPL55-230ENST00000489430 TWF1Q12792 350 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 DUSP4Q13115 394 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 WSCD1Q658N2 575 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 KRBA2Q6ZNG9 492 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 PDZD4Q76G19 769 aaPredicted RBP20.46■□□□□ 0.87
MRPL55-230ENST00000489430 NPAS3Q8IXF0 933 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 DCP1BQ8IZD4 617 aaKnown RBP20.46■□□□□ 0.87
MRPL55-230ENST00000489430 TOP6BLQ8N6T0 577 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 KIAA0895Q8NCT3 520 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 OR10T2Q8NGX3 314 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 FNBP1Q96RU3 617 aa20.46■□□□□ 0.87
MRPL55-230ENST00000489430 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms