RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 USP37Q86T82 979 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 GPBP1Q86WP2 473 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 TTC9BQ8N6N2 239 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 AK8Q96MA6 479 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 TMEM209Q96SK2 561 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 FIZ1Q96SL8 496 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
CPSF3-204ENST00000489403 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 DLL3Q9NYJ7 618 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 NCDNQ9UBB6 729 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 SMG5Q9UPR3 1016 aaKnown RBP13.47□□□□□ -0.25
CPSF3-204ENST00000489403 PIAS3Q9Y6X2 628 aa13.47□□□□□ -0.25
CPSF3-204ENST00000489403 A0A0B4J269 797 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 SLC26A4O43511 780 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 FAM13AO94988 1023 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 TYMPP19971 482 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 GRIN1Q05586 938 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 PLD1Q13393 1074 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 MYBPC2Q14324 1141 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.25
CPSF3-204ENST00000489403 MCM6Q14566 821 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 STXBP5Q5T5C0 1151 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 OVOS1Q6IE37 1185 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 JADE1Q6IE81 842 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 MYCT1Q8N699 235 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 GPR88Q9GZN0 384 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 LMAN1LQ9HAT1 526 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 PARVGQ9HBI0 331 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 CPSF3Q9UKF6 684 aaKnown RBP13.46□□□□□ -0.25
CPSF3-204ENST00000489403 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CPSF3-204ENST00000489403 TRAK2O60296 914 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 SOAT2O75908 522 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 NFICP08651 508 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 CHRNB1P11230 501 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 ODC1P11926 461 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 PLCG1P19174 1290 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 CCNE1P24864 410 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 ALDH1A3P47895 512 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 EPHB3P54753 998 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 LILRA4P59901 499 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 C9orf57Q5W0N0 161 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 GAREM2Q75VX8 874 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 ATAD1Q8NBU5 361 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 OR10T2Q8NGX3 314 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 E2F7Q96AV8 911 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 TSPAN18Q96SJ8 248 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 MSTO1Q9BUK6 570 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
CPSF3-204ENST00000489403 SCN1AP35498 2009 aa13.45□□□□□ -0.26
CPSF3-204ENST00000489403 WDR87Q6ZQQ6 2873 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 CHADO15335 359 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 SCP2P22307 547 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
CPSF3-204ENST00000489403 UBA7P41226 1012 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 CCR3P51677 355 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 FCHO2Q0JRZ9 810 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 GAS6Q14393 721 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 KARSQ15046 597 aaKnown RBP13.44□□□□□ -0.26
CPSF3-204ENST00000489403 RSPO4Q2I0M5 234 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-204ENST00000489403 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-204ENST00000489403 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 CD302Q8IX05 232 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 RAD54LQ92698 747 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 PSMG2Q969U7 264 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 ASB3Q9Y575 518 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 TCHHQ07283 1943 aa13.44□□□□□ -0.26
CPSF3-204ENST00000489403 F5P12259 2224 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 GPR179Q6PRD1 2367 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 ANO9A1A5B4 782 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 TISP43B9A030 160 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 ANKRD63C9JTQ0 380 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 PIRO00625 290 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 CYP11A1P05108 521 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 KRT18P05783 430 aaKnown RBP13.43□□□□□ -0.26
CPSF3-204ENST00000489403 GABRR2P28476 465 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 LONP1P36776 959 aaKnown RBP13.43□□□□□ -0.26
CPSF3-204ENST00000489403 SOX9P48436 509 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 ACOT2P49753 483 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 NRLP54845 237 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
CPSF3-204ENST00000489403 GTF2BQ00403 316 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 SATB1Q01826 763 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 PPP2R5DQ14738 602 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 TMEM132DQ14C87 1099 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 ZC2HC1CQ53FD0 456 aaPredicted RBP13.43□□□□□ -0.26
CPSF3-204ENST00000489403 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
CPSF3-204ENST00000489403 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms