RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 C2CD2LO14523 706 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 CAVIN2O95810 425 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 CST3P01034 146 aaPredicted RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 CYP11A1P05108 521 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 ALADP13716 330 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 NRIP1P48552 1158 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 NDUFV1P49821 464 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 MARSP56192 900 aaKnown RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 DLG4P78352 724 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 YWHAHQ04917 246 aaPredicted RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 MRPL58Q14197 206 aaKnown RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 PSMD5Q16401 504 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 DUSP6Q16828 381 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 ZACNQ401N2 412 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 RTL10Q7L3V2 364 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
COL4A5-206ENST00000489230 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 HDAC7Q8WUI4 952 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 FAXDC2Q96IV6 333 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 IMPG2Q9BZV3 1241 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 THAP9Q9H5L6 903 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 SIX4Q9UIU6 781 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 BRWD1Q9NSI6 2320 aa13.38□□□□□ -0.27
COL4A5-206ENST00000489230 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PMM2O15305 246 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 CNPP09543 421 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 IL9P15248 144 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 LHX1P48742 406 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 ADAM15Q13444 863 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 NCOA4Q13772 614 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 NFKBIBQ15653 356 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 RTP2Q5QGT7 225 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PLEKHO2Q8TD55 490 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PABPC5Q96DU9 382 aaKnown RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 DNAI2Q9GZS0 605 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 GZF1Q9H116 711 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 VRTNQ9H8Y1 702 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 MTRRQ9UBK8 725 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A5-206ENST00000489230 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
COL4A5-206ENST00000489230 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 I3L4J1 428 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 PER2O15055 1255 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 SPTLC1O15269 473 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 P4HA2O15460 535 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 TEX28O15482 410 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-206ENST00000489230 GCLMP48507 274 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 TNNC1P63316 161 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 TYRO3Q06418 890 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 HYAL1Q12794 435 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 SMARCB1Q12824 385 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 RAB33AQ14088 237 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-206ENST00000489230 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 TDRD10Q5VZ19 366 aaKnown RBP13.36□□□□□ -0.27
COL4A5-206ENST00000489230 C15orf39Q6ZRI6 1047 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 AUTS2Q8WXX7 1259 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 CASP10Q92851 521 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 PLEKHA4Q9H4M7 779 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
COL4A5-206ENST00000489230 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 PPEF2O14830 753 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 CSPG5O95196 566 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 TPM2P07951 284 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 TRIM21P19474 475 aaKnown RBP13.35□□□□□ -0.27
COL4A5-206ENST00000489230 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-206ENST00000489230 EEF1GP26641 437 aaKnown RBP13.35□□□□□ -0.27
COL4A5-206ENST00000489230 MXI1P50539 228 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 MYL6P60660 151 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 MYL7Q01449 175 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
COL4A5-206ENST00000489230 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms