RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 GPR17Q13304 367 aa25.9■■□□□ 1.74
PTPN18-213ENST00000489215 DUOXA2Q1HG44 320 aa25.9■■□□□ 1.74
PTPN18-213ENST00000489215 KRBA2Q6ZNG9 492 aa25.9■■□□□ 1.74
PTPN18-213ENST00000489215 BMP8AQ7Z5Y6 402 aa25.9■■□□□ 1.74
PTPN18-213ENST00000489215 SCN1AP35498 2009 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 RPN1P04843 607 aaKnown RBP25.89■■□□□ 1.74
PTPN18-213ENST00000489215 PTPN2P17706 415 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 ADCY1Q08828 1119 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 SMARCB1Q12824 385 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 SNRNP35Q16560 246 aaKnown RBP25.89■■□□□ 1.74
PTPN18-213ENST00000489215 WDR49Q8IV35 697 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 CSGALNACT2Q8N6G5 542 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 ZSWIM2Q8NEG5 633 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 FEZF2Q8TBJ5 459 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 FNBP1Q96RU3 617 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 INTS13Q9NVM9 706 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 HSFX1Q9UBD0 423 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 AGAP1Q9UPQ3 857 aa25.89■■□□□ 1.74
PTPN18-213ENST00000489215 FAM86C2PA6NEL3 165 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 SPTLC1O15269 473 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 ITGB3P05106 788 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 MYO1EQ12965 1108 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 STK4Q13043 487 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 PLD1Q13393 1074 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 PABPC1LQ4VXU2 614 aaKnown RBP25.88■■□□□ 1.73
PTPN18-213ENST00000489215 CBWD2Q8IUF1 395 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 C1orf127Q8N9H9 656 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 TMEM174Q8WUU8 243 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 MFSD14AQ96MC6 490 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 GDPD2Q9HCC8 539 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 AVENQ9NQS1 362 aaPredicted RBP25.88■■□□□ 1.73
PTPN18-213ENST00000489215 INSL5Q9Y5Q6 135 aa25.88■■□□□ 1.73
PTPN18-213ENST00000489215 CLIC2O15247 247 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 LAMP2P13473 410 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 POLR2BP30876 1174 aaKnown RBP25.87■■□□□ 1.73
PTPN18-213ENST00000489215 TDGQ13569 410 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 IQCEQ6IPM2 695 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 GET4Q7L5D6 327 aaPredicted RBP25.87■■□□□ 1.73
PTPN18-213ENST00000489215 TMEM130Q8N3G9 435 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 SPATA18Q8TC71 538 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 KCNK12Q9HB15 430 aa25.87■■□□□ 1.73
PTPN18-213ENST00000489215 CIZ1Q9ULV3 898 aaPredicted RBP25.87■■□□□ 1.73
PTPN18-213ENST00000489215 TMEM221A6NGB7 291 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 M0R296 226 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 PDXKO00764 312 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 ZNF197O14709 1029 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 EXOC3O60645 756 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 HUS1O60921 280 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 RHOBTB3O94955 611 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 KRT19P08727 400 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 COL9A1P20849 921 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 CYP2J2P51589 502 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 KCNB1Q14721 858 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 RNF19BQ6ZMZ0 732 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 TMEM86AQ8N2M4 240 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 RDH13Q8NBN7 331 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 LEMD2Q8NC56 503 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 C2orf15Q8WU43 125 aaKnown RBP25.86■■□□□ 1.73
PTPN18-213ENST00000489215 BORCS6Q96GS4 357 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 ZNF512Q96ME7 567 aaPredicted RBP25.86■■□□□ 1.73
PTPN18-213ENST00000489215 DNMT3BQ9UBC3 853 aaKnown RBP25.86■■□□□ 1.73
PTPN18-213ENST00000489215 HOOK1Q9UJC3 728 aaKnown RBP25.86■■□□□ 1.73
PTPN18-213ENST00000489215 CDH7Q9ULB5 785 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 HCN4Q9Y3Q4 1203 aa25.86■■□□□ 1.73
PTPN18-213ENST00000489215 TNNI1P19237 187 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 WNT7BP56706 349 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 DPYDQ12882 1025 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 PSMD6Q15008 389 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 DPH6Q7L8W6 267 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 SLC9A9Q8IVB4 645 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 KIAA0895Q8NCT3 520 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 MYADMQ96S97 322 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 MTMR12Q9C0I1 747 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 GDAP2Q9NXN4 497 aa25.85■■□□□ 1.73
PTPN18-213ENST00000489215 N4BP1O75113 896 aaKnown RBP25.84■■□□□ 1.73
PTPN18-213ENST00000489215 MICAL2O94851 1124 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 SEC24AO95486 1093 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 ASGR2P07307 311 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 CYP24A1Q07973 514 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 CYP4A22Q5TCH4 519 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 DCP1BQ8IZD4 617 aaKnown RBP25.84■■□□□ 1.73
PTPN18-213ENST00000489215 PBXIP1Q96AQ6 731 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 GOLPH3LQ9H4A5 285 aa25.84■■□□□ 1.73
PTPN18-213ENST00000489215 MRPS23Q9Y3D9 190 aaKnown RBP25.84■■□□□ 1.73
PTPN18-213ENST00000489215 ARIH1Q9Y4X5 557 aaPredicted RBP25.84■■□□□ 1.73
PTPN18-213ENST00000489215 CALUO43852 315 aaPredicted RBP25.83■■□□□ 1.73
PTPN18-213ENST00000489215 RHOP08100 348 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 ALDH1A3P47895 512 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 TUFMP49411 452 aaKnown RBP25.83■■□□□ 1.73
PTPN18-213ENST00000489215 AP3M2P53677 418 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 WSCD1Q658N2 575 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 MTSS1LQ765P7 747 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 GTPBP4Q9BZE4 634 aaKnown RBP25.83■■□□□ 1.73
PTPN18-213ENST00000489215 ZCWPW1Q9H0M4 648 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 RMND1Q9NWS8 449 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 ASB3Q9Y575 518 aa25.83■■□□□ 1.73
PTPN18-213ENST00000489215 DOCK8Q8NF50 2099 aa25.83■■□□□ 1.72
PTPN18-213ENST00000489215 DLATP10515 647 aaKnown RBP25.82■■□□□ 1.72
PTPN18-213ENST00000489215 EPHB3P54753 998 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 TWF1Q12792 350 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms